About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS20501VILLIN
HS20502CELL DIVISION PROTEIN KINASE
HS20503BLR7054 PROTEIN
HS20504N-MYRISTOYL TRANSFERASE
HS20505PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
HS20506HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1
HS20507PDZ DOMAIN-CONTAINING PROTEIN
HS20508PDZ DOMAIN-CONTAINING PROTEIN
HS20509LASP
HS20510TUMOR ENDOTHELIAL MARKER 7 RELATED
HS20511ADP RIBOSYLATION FACTOR-RELATED
HS20512VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT
HS2051360S RIBOSOMAL PROTEIN L19
HS20514ALPHA-2,8-SIALYLTRANSFERASE
HS20515CONNEXIN
HS20516TRANSLATION ELONGATION FACTOR-RELATED
HS20517PHOSPHATASE, ORPHAN 1, 2
HS20518ZINC FINGER PROTEIN
HS20519PROHIBITIN
HS20520DELTEX-RELATED
HS20521SYNAPTIC VESICLE MEMBRANE PROTEIN VAT-1 HOMOLOG-LIKE
HS20522RHO FAMILY GTPASE
HS20523
HS20524MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
HS20525MIXED LINEAGE PROTEIN KINASE
HS20526METHYLTRANSFERASE-RELATED
HS20527INTEGRIN BETA SUBUNIT
HS20528PROTEIN REPRIMO-RELATED
HS20529TELETHONIN
HS20530-
HS20531STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE
HS20532PROTEIN PHOSPHATASE INHIBITOR AND DOPAMINE- AND CAMP-REGULATED NEURONAL PHOSPHOPROTEIN
HS20533BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
HS20534
HS20535CELL DIVISION PROTEIN KINASE
HS20536
HS20537MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
HS20538STAC
HS20539ZINC FINGER PROTEIN
HS20540ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
HS20541PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT
HS20542PEPTIDYLPROLYL ISOMERASE
HS205435'-NUCLEOTIDASE
HS20544KELCH PROTEIN
HS20545ATP-CITRATE SYNTHASE
HS205462',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE
HS20547UNCHARACTERIZED
HS20548DNAJ HOMOLOG SUBFAMILY C MEMBER 7
HS20549NF-KAPPA-B INHIBITOR-INTERACTING RAS-LIKE PROTEIN
HS20550DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN
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