The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS19301 | HEAT SHOCK REGULATED 2 |
HS19302 | |
HS19303 | KINESIN-LIKE PROTEIN KLP-3 |
HS19304 | PRE-MRNA-SPLICING FACTOR CWF18 |
HS19305 | BEIGE/BEACH-RELATED |
HS19306 | TUMOR NECROSIS FACTOR RECEPTOR |
HS19307 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD2 |
HS19308 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
HS19309 | |
HS19310 | |
HS19311 | URIDINE PHOSPHORYLASE |
HS19312 | STATHMIN |
HS19313 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS19314 | FATTY ACID BINDING PROTEIN |
HS19315 | AUTOSOMAL HIGHLY CONSERVED PROTEIN |
HS19316 | ATAXIN 1 |
HS19317 | INTEGRIN ALPHA |
HS19318 | UNCHARACTERIZED |
HS19319 | |
HS19320 | ZINC FINGER-CONTAINING |
HS19321 | DUDULIN-RELATED |
HS19322 | C-REACTIVE PROTEIN-RELATED |
HS19323 | C-REACTIVE PROTEIN-RELATED |
HS19324 | DUDULIN-RELATED |
HS19325 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
HS19326 | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED |
HS19327 | FAST LEU-RICH DOMAIN-CONTAINING |
HS19328 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
HS19329 | DENN DOMAIN-CONTAINING PROTEIN 4 |
HS19330 | SUGAR TRANSPORTER |
HS19331 | G-PROTEIN COUPLED RECEPTOR |
HS19332 | STEROL O-ACYLTRANSFERASE |
HS19333 | ZINC FINGER PROTEIN |
HS19334 | INO80 COMPLEX SUBUNIT C |
HS19335 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
HS19336 | TRANSMEMBRANE PROTEIN |
HS19337 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
HS19338 | ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 |
HS19339 | SEC61 SUBUNIT BETA |
HS19340 | NUCLEAR HORMONE RECEPTOR |
HS19341 | SYNTAXIN |
HS19342 | ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44 |
HS19343 | ROLLING PEBBLES, ISOFORM B |
HS19344 | REGULATOR OF MICROTUBULE DYNAMICS PROTEIN |
HS19345 | |
HS19346 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
HS19347 | UNCHARACTERIZED |
HS19348 | PROTEIN PHOSPHATASE 2C |
HS19349 | CADHERIN-23 |
HS19350 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |