About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS19001G-PROTEIN SIGNALING MODULATOR 3
HS19002DEOXYRIBONUCLEASE II
HS19003GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS19004POLYCOMB-LIKE TRANSCRIPTION FACTOR
HS19005RAS GTPASE-ACTIVATING PROTEINS
HS19006SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
HS19007ADIPOR/PROGESTIN RECEPTOR-RELATED
HS19008TYROSINE-PROTEIN KINASE RECEPTOR
HS19009RNA-BINDING PROTEIN 8A
HS19010UBIQUITIN THIOESTERASE
HS19011MYOTUBULARIN-RELATED
HS19012
HS19013SYNAPTIC VESICLE GLYCOPROTEIN 2
HS19014BOLA TRANSCRIPTION REGULATOR
HS19015BOLA TRANSCRIPTION REGULATOR
HS19016NUCLEAR HORMONE RECEPTOR
HS19017CYTOKINE RECEPTOR
HS19018
HS19019RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN
HS19020RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN
HS19021RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN
HS19022RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN
HS19023MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
HS19024
HS19025UNCHARACTERIZED
HS19026UBIQUILIN
HS19027UNCHARACTERIZED
HS19028
HS19029LATE ENDOSOMAL/LYSOSOMAL MP1 INTERACTING PROTEIN
HS19030DRAB11-RELATED
HS19031DRAB11-RELATED
HS19032RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1
HS19033LAMIN DM0-RELATED
HS19034MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
HS19035DELTA-RELATED
HS19036SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN
HS19037VASCULAR CELL ADHESION MOLECULE 1
HS19038PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3
HS19039PERSULFIDE DIOXYGENASE ETHE1
HS19040ACROSIN-RELATED
HS19041ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS19042DNA-REPAIR PROTEIN XRCC1
HS19043SI:CH211-171H4.5-RELATED
HS19044NACHT, LRR AND CARD DOMAINS-CONTAINING
HS19045EPITHELIAL MEMBRANE PROTEIN-RELATED
HS19046CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19
HS19047ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT
HS19048FI24210P1
HS19049
HS19050IGLON FAMILY OF IMMUNOGLOBULIN SUPERFAMILY-RELATED
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