About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS19051FREE FATTY ACID RECEPTOR 2-RELATED
HS19052CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8
HS19053SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE
HS19054EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
HS19055EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
HS19056DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER
HS19057
HS19058TESTIS DEVELOPMENT-RELATED PROTEIN-RELATED
HS19059SODIUM/HYDROGEN EXCHANGER
HS19060MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
HS19061INTERFERON/INTERLEUKIN RECEPTOR
HS19062TITIN
HS19063FATTY ACID BINDING PROTEIN
HS19064SERINE/ARGININE RICH SPLICING FACTOR
HS19065PROLINE-RICH NUCLEAR RECEPTOR COACTIVATOR
HS19066G-PROTEIN COUPLED RECEPTOR
HS19067UNCHARACTERIZED
HS19068RHOMBOID-RELATED PROTEIN
HS19069CONNEXIN
HS19070ASSOCIATE OF C-MYC AMY-1
HS19071RAS-RELATED GTP BINDING RAG/GTR YEAST
HS19072POU DOMAIN
HS19073U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11
HS19074FOUR AND A HALF LIM DOMAINS PROTEIN
HS19075NEUROHYPOPHYSIAL HORMONES, N-TERMINAL DOMAIN CONTAINING PROTEIN
HS19076GTP-BINDING PROTEIN-RELATED
HS19077AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28
HS19078NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
HS19079SERINE/THREONINE PROTEIN KINASE
HS19080
HS19081MICROTUBULE-ASSOCIATED PROTEIN
HS19082THRAP3/BCLAF1
HS19083SH3 DOMAIN-CONTAINING
HS19084PROTEIN EVA-1 HOMOLOG B-RELATED
HS19085
HS19086SER/THR PROTEIN KINASE-TRB
HS19087OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN
HS19088DUF614 FAMILY PROTEIN-RELATED
HS1908928S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL
HS19090CYTOKINE RECEPTOR
HS19091
HS19092IONOTROPIC GLUTAMATE RECEPTOR
HS19093PROTEIN CBG26694
HS19094N4BP1-RELATED
HS19095DYNACTIN 1-RELATED MICROTUBULE-BINDING
HS19096INOSITOL 5-PHOSPHATASE
HS19097ZINC FINGER PROTEIN ZIC AND GLI
HS19098SUA5
HS19099ENDO-ALPHA-1,2-MANNOSIDASE
HS19100PROTEIN LIN-28
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