About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS19201ZINC FINGER PROTEIN
HS19202TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
HS19203ZINC FINGER PROTEIN
HS19204ZNF44 PROTEIN
HS19205
HS19206CHEMOTACTIC RECEPTOR
HS19207HYALURONAN SYNTHASE
HS19208TRYPSIN-RELATED
HS19209HYALURONAN SYNTHASE
HS19210SPERM ACROSOME MEMBRANE-ASSOCIATED PROTEIN 6
HS19211B-CELL TRANSLOCATION GENE
HS19212SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
HS19213ZINC FINGER PROTEIN
HS19214UNCHARACTERIZED
HS19215LY6/PLAUR DOMAIN-CONTAINING PROTEIN 8
HS19216SI:CH211-171H4.5-RELATED
HS19217SI:CH211-171H4.5-RELATED
HS19218TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
HS19219HEAT SHOCK PROTEIN 70KDA
HS19220CHYMOTRYPSIN-RELATED
HS19221LIN37 HOMOLOG
HS19222PROLINE AND SERINE-RICH PROTEIN 3
HS19223HEAT SHOCK PROTEINP-12.2-RELATED
HS19224GAMMA-SECRETASE SUBUNIT PEN-2
HS19225HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER
HS19226IGF-LIKE FAMILY RECEPTOR 1
HS19227AGAP004733-PA
HS19228ALZHEIMER'S DISEASE BETA-AMYLOID RELATED
HS19229ACROSIN-RELATED
HS19230NEPHRIN
HS19231
HS19232SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT GAMMA
HS19233
HS19234SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT GAMMA
HS19235ALPHA-TECTORIN-RELATED
HS19236SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT GAMMA
HS19237ANKYRIN REPEAT FAMILY A
HS19238HEMATOPOIETIC CELL SIGNAL TRANSDUCER
HS19239CASEIN KINASE II SUBUNIT ALPHA
HS19240PARAOXONASE
HS19241POTASSIUM CHANNEL, SUBFAMILY K
HS192424.1 G PROTEIN
HS19243NEUROPEPTIDE Y/PANCREATIC HORMONE/PEPTIDE YY
HS19244CASEIN KINASE II SUBUNIT BETA
HS19245ALLOGRAFT INFLAMMATORY FACTOR-1
HS19246IOJAP SUPERFAMILY ORTHOLOG
HS19247MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
HS19248NONSYNDROMIC HEARING IMPAIRMENT PROTEIN
HS19249OXYSTEROL-BINDING PROTEIN-RELATED
HS19250C5ORF31
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