About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018807-T1
LLU|FUN_018808-T1
LLU|FUN_018809-T1
LLU|FUN_018810-T1COLLAGEN ALPHA
LLU|FUN_018811-T1COLLAGEN ALPHA
LLU|FUN_018812-T1
LLU|FUN_018813-T1
LLU|FUN_018814-T1RING FINGER PROTEIN 127
LLU|FUN_018815-T1
LLU|FUN_018816-T1IQ DOMAIN-CONTAINING PROTEIN M
LLU|FUN_018817-T1IQ DOMAIN-CONTAINING PROTEIN M
LLU|FUN_018818-T1
LLU|FUN_018819-T1UNCHARACTERIZED
LLU|FUN_018820-T1REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
LLU|FUN_018821-T1DAP3-BINDING CELL DEATH ENHANCER 1
LLU|FUN_018822-T1SACSIN
LLU|FUN_018823-T1
LLU|FUN_018824-T1SACSIN
LLU|FUN_018825-T1SACSIN
LLU|FUN_018826-T1
LLU|FUN_018827-T1ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
LLU|FUN_018828-T1ACYL-COA SYNTHETASE
LLU|FUN_018829-T1SACSIN
LLU|FUN_018830-T1
LLU|FUN_018831-T1
LLU|FUN_018832-T1EXPRESSED PROTEIN
LLU|FUN_018833-T1
LLU|FUN_018834-T1NUCLEAR MOVEMENT PROTEIN NUDC
LLU|FUN_018835-T1VACUOLAR PROTEIN SORTING VPS16
LLU|FUN_018836-T1VACUOLAR PROTEIN SORTING VPS16
LLU|FUN_018839-T1
LLU|FUN_018840-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_018841-T1OS05G0310600 PROTEIN
LLU|FUN_018842-T1
LLU|FUN_018843-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_018844-T1LOC100145250 PROTEIN
LLU|FUN_018845-T1
LLU|FUN_018846-T1
LLU|FUN_018847-T1MUCIN-22
LLU|FUN_018848-T1SMAD
LLU|FUN_018849-T1
LLU|FUN_018850-T1
LLU|FUN_018851-T1
LLU|FUN_018852-T1SULFATE TRANSPORTER
LLU|FUN_018853-T1
LLU|FUN_018854-T1
LLU|FUN_018855-T1
LLU|FUN_018856-T1
LLU|FUN_018857-T1
LLU|FUN_018858-T1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
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