About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_018653-T1
LLU|FUN_018654-T1UNCHARACTERIZED
LLU|FUN_018655-T1CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19
LLU|FUN_018656-T1MYOTROPHIN
LLU|FUN_018657-T1IRE1-RELATED
LLU|FUN_018658-T1TEX2 PROTEIN-RELATED
LLU|FUN_018659-T1TRINUCLEOTIDE REPEAT-CONTAINING GENE 6
LLU|FUN_018660-T1NUCLEAR HORMONE RECEPTOR HR3-RELATED
LLU|FUN_018661-T1UNCHARACTERIZED
LLU|FUN_018662-T1PROTEIN DISULFIDE ISOMERASE
LLU|FUN_018664-T1
LLU|FUN_018665-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
LLU|FUN_018666-T1
LLU|FUN_018667-T1
LLU|FUN_018668-T1
LLU|FUN_018669-T1
LLU|FUN_018670-T1
LLU|FUN_018671-T1LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
LLU|FUN_018672-T1
LLU|FUN_018673-T1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
LLU|FUN_018674-T1
LLU|FUN_018675-T1
LLU|FUN_018676-T1IRE1-RELATED
LLU|FUN_018677-T1
LLU|FUN_018678-T1
LLU|FUN_018679-T1
LLU|FUN_018680-T1
LLU|FUN_018681-T1
LLU|FUN_018682-T1
LLU|FUN_018683-T1
LLU|FUN_018684-T1
LLU|FUN_018685-T1
LLU|FUN_018686-T1
LLU|FUN_018687-T1ALDO/KETO REDUCTASE
LLU|FUN_018688-T1BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89
LLU|FUN_018689-T1NONSYNDROMIC HEARING IMPAIRMENT PROTEIN
LLU|FUN_018690-T11-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED
LLU|FUN_018691-T1
LLU|FUN_018692-T11-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
LLU|FUN_018693-T1
LLU|FUN_018696-T1
LLU|FUN_018697-T1NUCLEAR HORMONE RECEPTOR
LLU|FUN_018698-T1
LLU|FUN_018699-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_018700-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_018701-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_018702-T1OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED
LLU|FUN_018703-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_018704-T1
LLU|FUN_018705-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
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