About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS18551PROTEIN DOK-7
HS18552ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS18553ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS18554HOMEOBOX PROTEIN HMX
HS18555PROTEASE M14 CARBOXYPEPTIDASE
HS18556G-PROTEIN COUPLED RECEPTOR
HS18557UNCHARACTERIZED
HS18558TYROSINE-PROTEIN KINASE
HS18559DUAL SPECIFICITY PROTEIN KINASE
HS18560PHOSPHOLIPID SCRAMBLASE-RELATED
HS18561COLD SHOCK DOMAIN CONTAINING PROTEINS
HS18562UNCHARACTERIZED
HS18563ELONGATOR COMPLEX PROTEIN 5
HS18564DULLARD PROTEIN PHOSPHATASE
HS18565MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
HS18566G PROTEIN PATHWAY SUPPRESSOR 2
HS18567SOLUTE CARRIER FAMILY 2
HS18568CELLULAR TUMOR ANTIGEN P53
HS18569TENASCIN
HS18570E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS18571VILLIN
HS18572DNA-DIRECTED RNA POLYMERASE
HS18573ZINC FINGER PROTEIN
HS18574LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN
HS18575NEURALIZED
HS18576SCP160
HS18577
HS18578GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS18579
HS18580SI:DKEY-19B23.11-RELATED
HS18581SI:DKEY-19B23.11-RELATED
HS18582
HS18583ZYXIN/TRIP6
HS18584AGAP004733-PA
HS18585MONOCARBOXYLATE TRANSPORTER
HS18586CENTAURIN/ARF
HS18587DRONGO, ISOFORM F
HS18588
HS18589INSULIN RECEPTOR SUBSTRATE
HS18590
HS18591UNCHARACTERIZED
HS18592UNCHARACTERIZED
HS18593SEGMENT POLARITY PROTEIN DISHEVELLED
HS18594
HS18595T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED
HS18596T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED
HS18597T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED
HS18598T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED
HS18599
HS18600T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED
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