About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS18451ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED
HS18452FOS TRANSCRIPTION FACTOR-RELATED
HS18453SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B
HS18454GLYCOPROTEIN HORMONE BETA CHAIN
HS18455GLYCOPROTEIN HORMONE ALPHA-2
HS18456MEMBRANE-ANCHORED JUNCTION PROTEIN MAJIN
HS184572,5-DIKETO-D-GLUCONIC ACID REDUCTASE
HS18458BCL2-ASSOCIATED AGONIST OF CELL DEATH
HS18459SODIUM/CALCIUM EXCHANGER
HS18460PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
HS18461PROTEIN PHOSPHATASE 1 INHIBITOR POTENTIATED BY PROTEIN KINASE C
HS18462BREAST CANCER METASTASIS-SUPPRESSOR 1
HS18463
HS18464TRANSMEMBRANE PROTEIN 179B
HS18465HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26
HS18466
HS18467RIBOSOMAL PROTEIN S6 KINASE
HS184684F2 CELL-SURFACE ANTIGEN HEAVY CHAIN
HS18469REST COREPRESSOR COREST PROTEIN-RELATED
HS18470PYRUVATE CARBOXYLASE
HS18471SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS18472TRANSMEMBRANE PROTEIN 151 HOMOLOG
HS18473PF6
HS18474DNA-DAMAGE-INDUCIBLE TRANSCRIPT 4 PROTEIN DDIT4
HS18475
HS18476SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
HS18477BANK1/PIK3AP1 FAMILY MEMBER
HS18478
HS18479NUCLEAR FACTOR I
HS18480ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
HS18481PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
HS18482UNCHARACTERIZED
HS18483DENN DOMAIN-CONTAINING PROTEIN 4
HS18484AUSTRALIN, ISOFORM A-RELATED
HS18485PERILIPIN
HS18486ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
HS18487NACHT, LRR AND CARD DOMAINS-CONTAINING
HS18488LUPUS LA PROTEIN-RELATED
HS18489SI:CH211-266K2.1
HS18490ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
HS18491OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC
HS1849260S RIBOSOMAL PROTEIN L34
HS18493SODIUM/POTASSIUM/CALCIUM EXCHANGER
HS18494SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGEN
HS18495LEUCINE-RICH REPEAT-CONTAINING PROTEIN
HS18496IRE1-RELATED
HS18497NACHT, LRR AND CARD DOMAINS-CONTAINING
HS18498
HS18499
HS18500
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