The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS18251 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS18252 | ACROSIN-RELATED |
HS18253 | 5-HYDROXYTRYPTAMINE RECEPTOR |
HS18254 | WASP-1 |
HS18255 | G-PROTEIN COUPLED RECEPTOR |
HS18256 | PREFOLDIN SUBUNIT 3 |
HS18257 | RAB FAMILY |
HS18258 | CLATHRIN ASSEMBLY PROTEIN |
HS18259 | RAB FAMILY |
HS18260 | DRAB11-RELATED |
HS18261 | PREFOLDIN SUBUNIT 3 |
HS18262 | |
HS18263 | |
HS18264 | GRB2-ASSOCIATED-BINDING PROTEIN |
HS18265 | COLLAGEN ALPHA |
HS18266 | COLLAGEN ALPHA |
HS18267 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
HS18268 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
HS18269 | BUTYROPHILIN |
HS18270 | |
HS18271 | FAM11A, B PROTEIN |
HS18272 | CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 |
HS18273 | |
HS18274 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
HS18275 | HAD SUPERFAMILY MEMBERS CMAS AND KDSC |
HS18276 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
HS18277 | TRIOKINASE/FMN CYCLASE |
HS18278 | SEC15 |
HS18279 | CYTOCHROME P450 26 |
HS18280 | FER-1-LIKE |
HS18281 | |
HS18282 | SMALL INTEGRAL MEMBRANE PROTEIN 13 |
HS18283 | |
HS18284 | UNCHARACTERIZED |
HS18285 | B-BOX DOMAIN CONTAINING |
HS18286 | B-BOX DOMAIN CONTAINING |
HS18287 | B-BOX DOMAIN CONTAINING |
HS18288 | B-BOX DOMAIN CONTAINING |
HS18289 | CEREBELLIN-RELATED |
HS18290 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
HS18291 | N4BP1-RELATED |
HS18292 | ADENYLATE CYCLASE TYPE 1 |
HS18293 | 40S RIBOSOMAL PROTEIN S3A |
HS18294 | ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 |
HS18295 | PHOSPHOLIPID ACYLTRANSFERASE |
HS18296 | RIBOSOME BIOGENESIS PROTEIN NOP10 |
HS18297 | |
HS18298 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
HS18299 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
HS18300 | AGAP000281-PA |