About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS18101
HS18102ZINC FINGER PROTEIN
HS18103
HS18104DRONGO, ISOFORM F
HS18105FOLATE TRANSPORTER
HS18106
HS18107WD40 REPEAT PROTEIN
HS18108A KINASE ANCHOR PROTEIN
HS18109PTB-CONTAINING, CUBILIN AND LRP1-INTERACTING PROTEIN
HS18110ZINC FINGER PROTEIN 200
HS18111PROTEIN CBG26694
HS18112
HS18113
HS18114
HS18115MYELIN P0 RELATED
HS18116REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS18117ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32
HS18118SH3 DOMAIN-CONTAINING
HS18119BUTYROPHILIN
HS18120IMMUNOGLOBULIN FC RECEPTOR
HS18121IMMUNOGLOBULIN FC RECEPTOR
HS18122GTP-BINDING PROTEIN ALPHA SUBUNIT
HS18123TYROSINE-PROTEIN KINASE
HS18124MITOGEN-ACTIVATED PROTEIN KINASE
HS18125ABC TRANSPORTER G FAMILY MEMBER 28
HS18126E3 UBIQUITIN-PROTEIN LIGASE ATL42
HS18127PROTEIN PHOSPHATASE METHYLESTERASE-1 RELATED
HS18128
HS18129INVERTED FORMIN-2
HS18130PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
HS18131ANAPHASE-PROMOTING COMPLEX 10
HS18132ATP-BINDING TRANSPORT PROTEIN-RELATED
HS18133
HS18134
HS18135OTU DOMAIN CONTAINING PROTEIN
HS18136REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS18137
HS18138REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS18139CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
HS18140SOLUTE CARRIER FAMILY 10 MEMBER 7
HS18141TETRATRICOPEPTIDE REPEAT PROTEIN 29
HS18142G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS18143NACHT, LRR AND CARD DOMAINS-CONTAINING
HS18144SERINE/THREONINE-PROTEIN KINASE
HS18145
HS18146UBIQUITIN-CONJUGATING ENZYME E2
HS18147REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS18148
HS18149CORONIN
HS18150E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
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