About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 352 353 354 355 356 357 358 359 360 361 Forward> Last>>        450 pages in total

Gene IDDescription
HS17851ALMS1-RELATED
HS17852MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17
HS17853
HS17854
HS17855PANNEXIN
HS17856REMODELING AND SPACING FACTOR 1
HS17857CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN
HS17858AQUAPORIN
HS17859SERINE/THREONINE-PROTEIN KINASE TAO
HS17860GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
HS17861MYOSIN VII, XV
HS17862OLFACTORY MARKER PROTEIN
HS17863CALPAIN
HS17864
HS17865REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS17866RP42 RELATED
HS17867CULLIN
HS17868DUF914-RELATED
HS17869FLOTILLIN-RELATED
HS17870UNCHARACTERIZED
HS1787130S/40S RIBOSOMAL PROTEIN S3
HS17872POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
HS17873UNCHARACTERIZED
HS17874MTH938 DOMAIN-CONTAINING PROTEIN
HS17875SI:CH211-243P7.3-RELATED
HS17876
HS17877STERILE20-LIKE KINASE, ISOFORM B-RELATED
HS17878EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11
HS17879CALPAIN
HS17880SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
HS17881SECRETED MODULAR CALCIUM-BINDING PROTEIN
HS17882ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS17883RETROTRANSPOSON
HS17884ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS17885PROTEIN-TYROSINE SULFOTRANSFERASE 2
HS17886SLIT HOMOLOG
HS17887DULLARD PROTEIN PHOSPHATASE
HS17888DYNACTIN 1-RELATED MICROTUBULE-BINDING
HS17889UNCHARACTERIZED
HS17890
HS17891LUNG SEVEN TRANSMEMBRANE RECEPTOR
HS17892CALPAIN, SMALL SUBUNIT 1 A-RELATED
HS17893SYNAPTOSOMAL ASSOCIATED PROTEIN
HS17894AGAP001331-PA-RELATED
HS17895SRCR DOMAIN-CONTAINING PROTEIN
HS17896HISTONE H3
HS17897SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS17898ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS17899VIRAL ENVELOPE PROTEIN
HS17900REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
TOP