About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS17751DUAL SPECIFICITY PROTEIN KINASE
HS1775252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
HS17753STOP PROTEIN
HS17754HISTONE H4 TRANSCRIPTION FACTOR-RELATED
HS17755MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13
HS17756PROTEIN C3ORF33
HS17757ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
HS17758CALCIUM-SENSING RECEPTOR-RELATED
HS17759CALCIUM-SENSING RECEPTOR-RELATED
HS17760CALCIUM-SENSING RECEPTOR-RELATED
HS17761CALCIUM-SENSING RECEPTOR-RELATED
HS17762CALCIUM-SENSING RECEPTOR-RELATED
HS17763CALCIUM-SENSING RECEPTOR-RELATED
HS17764CALCIUM-SENSING RECEPTOR-RELATED
HS17765CALCIUM-SENSING RECEPTOR-RELATED
HS17766REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS17767CALCIUM-SENSING RECEPTOR-RELATED
HS17768CALCIUM-SENSING RECEPTOR-RELATED
HS17769CALCIUM-SENSING RECEPTOR-RELATED
HS17770CALCIUM-SENSING RECEPTOR-RELATED
HS17771CALCIUM-SENSING RECEPTOR-RELATED
HS17772CALCIUM-SENSING RECEPTOR-RELATED
HS17773CALCIUM-SENSING RECEPTOR-RELATED
HS17774CALCIUM-SENSING RECEPTOR-RELATED
HS17775CALCIUM-SENSING RECEPTOR-RELATED
HS17776CALCIUM-SENSING RECEPTOR-RELATED
HS17777ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
HS17778NEUROPEPTIDES RECEPTOR
HS17779ATP-DEPENDENT RNA HELICASE
HS17780GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS17781RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
HS17782PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS17783MUSCLEBLIND-LIKE PROTEIN
HS17784PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS17785AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
HS17786SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS17787P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS17788P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS17789MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1
HS17790PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS17791
HS17792SCHWANNOMIN INTERACTING PROTEIN 1
HS17793
HS17794THO COMPLEX SUBUNIT 1
HS17795HYPOTHETICAL PROTEIN LOC100362176
HS17796OUTER SEGMENT 5
HS17797STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
HS17798OUTER SEGMENT 5
HS17799IMPORTIN ALPHA
HS17800ADP RIBOSYLATION FACTOR-RELATED
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