About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS17501SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
HS17502SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
HS17503FLAVIN REDUCTASE (NADPH)
HS17504CELL DIVISION CYCLE ASSOCIATED PROTEIN 4/SERTA DOMAIN-CONTAINING PROTEIN 2
HS17505POTASSIUM CHANNEL, SUBFAMILY K
HS17506DUAL SPECIFICITY PROTEIN KINASE
HS17507
HS17508PERIAXIN/AHNAK
HS17509PERIAXIN/AHNAK
HS17510REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS17511
HS17512PHOSPHOLIPASE D - RELATED
HS17513REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS17514FORKHEAD BOX PROTEIN
HS17515MYELIN TRANSCRIPTION FACTOR 1-RELATED
HS17516DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA34
HS17517
HS17518KH DOMAIN CONTAINING RNA BINDING PROTEIN
HS17519LYSOPHOSPHATIDIC ACID RECEPTOR 5/SPHINGOSYLPHOSPHORYLCHOLINE RECEPTOR
HS17520SI:CH211-196P9.1-RELATED
HS17521WD-40 REPEAT PROTEIN
HS17522RHOMBOID-RELATED PROTEIN
HS17523N-ACETYLGALACTOSAMINYLTRANSFERASE
HS17524CALCIUM-BINDING PROTEIN 8-RELATED
HS17525ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS17526S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE
HS17527RIBOSOME MATURATION PROTEIN SBDS
HS17528CLAUDIN
HS17529CLAUDIN
HS17530CLAUDIN
HS17531CLAUDIN
HS17532CLAUDIN
HS17533CLAUDIN
HS17534CLAUDIN
HS17535CLAUDIN
HS17536CLAUDIN
HS17537CLAUDIN
HS17538CLAUDIN
HS17539CLAUDIN
HS17540CLAUDIN
HS17541CLAUDIN
HS17542CLAUDIN
HS17543CLAUDIN
HS17544AGAP005574-PA
HS17545SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED
HS17546TGF-BETA FAMILY
HS17547
HS17548CELL DIVISION PROTEIN KINASE
HS17549CYTOCHROME P450 508A4-RELATED
HS17550GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1
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