About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 341 342 343 344 345 346 347 348 349 350 Forward> Last>>        450 pages in total

Gene IDDescription
HS17301APOLIPOPROTEIN
HS17302NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED
HS17303SID1 TRANSMEMBRANE FAMILY MEMEBER
HS17304MAP/MICROTUBULE AFFINITY-REGULATING KINASE
HS17305
HS17306REVERSE TRANSCRIPTASES
HS17307TRANSMEMBRANE PROTEIN 25
HS17308T-CELL SURFACE GLYCOPROTEIN CD3 GAMMA CHAIN / DELTA CHAIN
HS17309T-CELL SURFACE GLYCOPROTEIN CD3 GAMMA CHAIN / DELTA CHAIN
HS17310MYELIN P0 RELATED
HS17311MYELIN P0 RELATED
HS17312
HS17313IGLON FAMILY OF IMMUNOGLOBULIN SUPERFAMILY-RELATED
HS17314ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
HS17315IMMUNOGLOBULIN SUPERFAMILY MEMBER 11
HS17316
HS17317
HS17318TUMOR PROTEIN P53-INDUCIBLE PROTEIN 13
HS17319G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
HS17320G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
HS17321ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13
HS17322SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG
HS17323SODIUM/CHLORIDE DEPENDENT TRANSPORTER
HS17324BLEOMYCIN HYDROLASE
HS17325
HS17326RAP GTPASE-ACTIVATING PROTEIN
HS17327
HS17328VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A
HS17329NG37
HS17330SODIUM/CHLORIDE DEPENDENT TRANSPORTER
HS17331CLOCK-INTERACTING PACEMAKER
HS17332CYCLINS
HS17333RIBOSOMAL PROTEIN S6 KINASE
HS17334ATP-DEPENDENT RNA HELICASE
HS17335ZONA PELLUCIDA SPERM-BINDING PROTEIN
HS17336P2X PURINOCEPTOR
HS17337SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
HS17338HEAT SHOCK PROTEIN 70KDA
HS17339
HS17340GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
HS17341SERINE PROTEASE INHIBITOR, SERPIN
HS17342
HS17343NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
HS17344SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
HS17345MATRIX METALLOPROTEINASE
HS17346MATRIX METALLOPROTEINASE
HS17347MATRIX METALLOPROTEINASE
HS17348C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
HS17349TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1
HS17350SIALATE O-ACETYLESTERASE
TOP