About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS17651BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
HS17652BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
HS17653UNCHARACTERIZED
HS17654UNCHARACTERIZED
HS17655RHO-TYPE GTPASE ACTIVATING PROTEIN
HS17656ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS17657BEIGE/BEACH-RELATED
HS17658CELL FATE DETERMINING PROTEIN MAB21-RELATED
HS17659SERINE/THREONINE-PROTEIN KINASE
HS17660OLFACTORY RECEPTOR 56B1-RELATED
HS17661CADHERIN-87A
HS17662G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS17663G-PROTEIN COUPLED RECEPTOR
HS17664G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS17665NEUROTRANSMITTER GATED ION CHANNEL
HS17666FGF RECEPTOR ACTIVATING PROTEIN 1
HS17667STROMAL INTERACTION MOLECULE HOMOLOG
HS17668PROTEIN SEL-1 HOMOLOG 3
HS17669PROTEIN SIDEKICK
HS17670ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
HS17671PROTEIN SIDEKICK
HS17672AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B
HS17673SERINE-THREONINE PROTEIN KINASE
HS17674UNCHARACTERIZED
HS17675CYTOCHROME P450 508A4-RELATED
HS17676NECTIN-RELATED
HS17677PHD-TYPE DOMAIN-CONTAINING PROTEIN
HS17678NECTIN-RELATED
HS17679G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS17680DIABLO HOMOLOG, MITOCHONDRIAL
HS17681G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS17682DIABLO HOMOLOG, MITOCHONDRIAL
HS17683UNCHARACTERIZED
HS17684MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
HS17685MAP/MICROTUBULE AFFINITY-REGULATING KINASE
HS1768614-3-3 PROTEIN
HS17687RIM BINDING PROTEIN-RELATED
HS17688CARBONIC ANHYDRASE
HS17689ADENINE PHOSPHORIBOSYLTRANSFERASE
HS17690RAS-RELATED PROTEIN RAB
HS17691CT120 PROTEIN
HS17692KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED
HS17693PROTEIN CBG16200
HS17694TNF RECEPTOR ASSOCIATED FACTOR
HS17695TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED
HS17696IP21249P
HS17697AP1 GAMMA SUBUNIT BINDING PROTEIN 1
HS17698HEPATOCYTE NUCLEAR FACTOR 1
HS17699DYNEIN LIGHT CHAIN
HS17700FRUCTOSE-BISPHOSPHATE ALDOLASE
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