About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS18651CYTOKINE RECEPTOR
HS18652NEPHRIN
HS18653
HS18654NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT
HS18655
HS18656UBIQUITIN THIOLESTERASE PROTEIN OTUB
HS18657SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN
HS18658MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
HS18659ALPHA-PROTEIN KINASE 1
HS18660GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS18661
HS18662PIKACHURIN-LIKE PROTEIN
HS18663TRANSPOSON TY3-I GAG-POL POLYPROTEIN
HS18664SI:CH211-196P9.1-RELATED
HS18665TRANSPOSABLE ELEMENT-RELATED
HS18666SERINE-THREONINE PROTEIN KINASE
HS18667HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
HS18668UPF0696 PROTEIN C11ORF68
HS18669NUCLEAR FACTOR NF-KAPPA-B PROTEIN
HS18670SERINE/THREONINE PROTEIN PHOSPHATASE
HS18671EQUILIBRATIVE NUCLEOSIDE TRANSPORTER
HS18672S100 CALCIUM-BINDING PROTEIN
HS18673TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13
HS18674UNCHARACTERIZED
HS18675RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
HS18676
HS18677SMALL INDUCIBLE CYTOKINE A
HS18678SENTRIN/SUMO-SPECIFIC PROTEASE
HS18679ATP-DEPENDENT RNA HELICASE DBP3
HS18680SOX TRANSCRIPTION FACTOR
HS186815-HYDROXYTRYPTAMINE RECEPTOR
HS18682LYSOPHOSPHATIDIC ACID RECEPTOR 5/SPHINGOSYLPHOSPHORYLCHOLINE RECEPTOR
HS18683MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED
HS18684UNCHARACTERIZED
HS18685TRANSMEMBRANE 4 L6 FAMILY MEMBER 1-RELATED
HS18686GALACTOSE-3-O-SULFOTRANSFERASE
HS18687ALPHA-TECTORIN-RELATED
HS18688MICROTUBULE-ASSOCIATED PROTEIN 11
HS18689SERINE PROTEASE INHIBITOR, SERPIN
HS18690ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
HS18691
HS18692NEUROSECRETORY PROTEIN VGF
HS18693SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 2
HS18694ACETYLCHOLINESTERASE
HS18695SCHWANNOMIN INTERACTING PROTEIN 1
HS18696G-PROTEIN COUPLED RECEPTOR
HS18697CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
HS18698RIBONUCLEASE KAPPA
HS18699LIPOXYGENASE
HS18700PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1
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