About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_017446-T1ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2
LLU|FUN_017447-T1PEPTIDASE
LLU|FUN_017448-T1
LLU|FUN_017449-T1
LLU|FUN_017450-T1O-METHYLTRANSFERASE-RELATED
LLU|FUN_017451-T1
LLU|FUN_017452-T1CYTOCHROME P450 508A4-RELATED
LLU|FUN_017453-T1DISCS LARGE
LLU|FUN_017454-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_017455-T1
LLU|FUN_017456-T1
LLU|FUN_017457-T1
LLU|FUN_017458-T1
LLU|FUN_017459-T1
LLU|FUN_017460-T140S RIBOSOMAL PROTEIN S17
LLU|FUN_017461-T1
LLU|FUN_017462-T1OSTEOCLAST-STIMULATING FACTOR 1
LLU|FUN_017463-T1WINS1, 2 PROTEIN
LLU|FUN_017464-T1UPF0462 PROTEIN
LLU|FUN_017465-T1
LLU|FUN_017466-T1GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1
LLU|FUN_017467-T1
LLU|FUN_017468-T1
LLU|FUN_017469-T1
LLU|FUN_017470-T160S RIBOSOMAL PROTEIN L31
LLU|FUN_017471-T1DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL
LLU|FUN_017472-T1ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
LLU|FUN_017473-T1
LLU|FUN_017474-T1PATCHED-RELATED
LLU|FUN_017475-T1
LLU|FUN_017476-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_017477-T130S/40S RIBOSOMAL PROTEIN S3
LLU|FUN_017478-T1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
LLU|FUN_017479-T1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
LLU|FUN_017480-T1
LLU|FUN_017481-T1
LLU|FUN_017482-T1
LLU|FUN_017483-T1
LLU|FUN_017484-T1
LLU|FUN_017485-T1
LLU|FUN_017486-T1
LLU|FUN_017487-T1
LLU|FUN_017488-T1
LLU|FUN_017489-T1MULTIDRUG RESISTANCE PROTEIN
LLU|FUN_017490-T1
LLU|FUN_017491-T1MULTIDRUG RESISTANCE PROTEIN
LLU|FUN_017492-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_017493-T1
LLU|FUN_017494-T1PROTEIN CBG03580
LLU|FUN_017495-T1
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