About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_017246-T1GLOBIN-LIKE PROTEIN
LLU|FUN_017247-T1BLR2807 PROTEIN
LLU|FUN_017248-T1TTC17 PROTEIN
LLU|FUN_017249-T1HCG1796489
LLU|FUN_017250-T1
LLU|FUN_017251-T1
LLU|FUN_017252-T1
LLU|FUN_017253-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_017254-T1
LLU|FUN_017255-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_017256-T1ATP SYNTHASE F CHAIN, MITOCHONDRIAL-RELATED
LLU|FUN_017257-T1
LLU|FUN_017258-T1
LLU|FUN_017259-T1
LLU|FUN_017260-T1SUGAR HYDROLASE-RELATED
LLU|FUN_017261-T1NUCLEAR FACTOR-RELATED
LLU|FUN_017262-T1HIKESHI FAMILY MEMBER
LLU|FUN_017263-T1EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
LLU|FUN_017264-T1EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
LLU|FUN_017265-T1FIMBRIN/PLASTIN
LLU|FUN_017266-T1
LLU|FUN_017267-T1
LLU|FUN_017268-T1
LLU|FUN_017269-T1
LLU|FUN_017270-T1
LLU|FUN_017271-T1OS10G0105400 PROTEIN
LLU|FUN_017272-T1
LLU|FUN_017273-T1PROTEIN CBG03580
LLU|FUN_017274-T1
LLU|FUN_017275-T1
LLU|FUN_017276-T1NETRIN RECEPTOR UNC5
LLU|FUN_017277-T1SCAVENGER RECEPTOR CLASS F
LLU|FUN_017278-T1
LLU|FUN_017279-T1
LLU|FUN_017280-T1
LLU|FUN_017281-T1
LLU|FUN_017282-T1DNA2/NAM7 HELICASE FAMILY MEMBER
LLU|FUN_017283-T1
LLU|FUN_017284-T1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
LLU|FUN_017285-T1
LLU|FUN_017286-T1MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
LLU|FUN_017287-T1
LLU|FUN_017288-T1
LLU|FUN_017289-T1
LLU|FUN_017290-T1
LLU|FUN_017291-T1MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
LLU|FUN_017292-T1
LLU|FUN_017293-T1
LLU|FUN_017294-T1CHARGED MULTIVESICULAR BODY PROTEIN
LLU|FUN_017295-T1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN
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