About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_017546-T1
LLU|FUN_017547-T1
LLU|FUN_017548-T1COATOMER SUBUNIT EPSILON
LLU|FUN_017549-T1TUBULIN POLYGLUTAMYLASE
LLU|FUN_017550-T1PYGOPUS
LLU|FUN_017551-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_017552-T1
LLU|FUN_017553-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_017554-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_017555-T1ORGANIC ANION TRANSPORTER
LLU|FUN_017556-T1
LLU|FUN_017557-T1
LLU|FUN_017558-T1
LLU|FUN_017559-T1COLLAGEN ALPHA
LLU|FUN_017560-T1
LLU|FUN_017561-T1
LLU|FUN_017562-T1
LLU|FUN_017563-T1
LLU|FUN_017564-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_017565-T1
LLU|FUN_017566-T1
LLU|FUN_017567-T1
LLU|FUN_017568-T1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
LLU|FUN_017569-T1
LLU|FUN_017570-T1
LLU|FUN_017571-T1
LLU|FUN_017572-T1
LLU|FUN_017573-T1TRANSAMIDASE
LLU|FUN_017574-T1
LLU|FUN_017575-T1CORTACTIN AND DREBRIN
LLU|FUN_017576-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_017577-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_017578-T1LP06937P
LLU|FUN_017579-T1ZINC FINGER PROTEIN
LLU|FUN_017580-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
LLU|FUN_017581-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
LLU|FUN_017582-T1
LLU|FUN_017583-T1
LLU|FUN_017584-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
LLU|FUN_017585-T1
LLU|FUN_017586-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
LLU|FUN_017587-T1RE52028P
LLU|FUN_017588-T1CLEAVAGE STIMULATION FACTOR SUBUNIT 2
LLU|FUN_017589-T1
LLU|FUN_017590-T1
LLU|FUN_017591-T1UPF0041 BRAIN PROTEIN 44-RELATED
LLU|FUN_017592-T1MUTT/NUDIX HYDROLASE
LLU|FUN_017593-T1
LLU|FUN_017594-T1
LLU|FUN_017595-T1
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