About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_017559-T1
OS493_017560-T1EXPRESSED PROTEIN
OS493_017561-T1EXPRESSED PROTEIN
OS493_017562-T1EXPRESSED PROTEIN
OS493_017563-T1
OS493_017564-T1
OS493_017565-T1
OS493_017566-T1
OS493_017567-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_017568-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_017569-T1
OS493_017570-T1
OS493_017571-T1
OS493_017572-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_017573-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_017574-T1
OS493_017575-T1DELTEX-RELATED
OS493_017576-T1LIPOXYGENASE
OS493_017578-T1HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5
OS493_017579-T1
OS493_017580-T1
OS493_017581-T1
OS493_017582-T1-
OS493_017583-T1GRB2-ASSOCIATED-BINDING PROTEIN
OS493_017584-T1
OS493_017585-T1SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
OS493_017587-T1CEREBLON
OS493_017588-T1DNAJ HOMOLOG SUBFAMILY B MEMBER 9
OS493_017589-T1WD40 REPEAT PROTEIN SWD2
OS493_017590-T1
OS493_017591-T1
OS493_017592-T1
OS493_017593-T1
OS493_017594-T1
OS493_017595-T1
OS493_017598-T1
OS493_017599-T1
OS493_017600-T1
OS493_017601-T1
OS493_017602-T1
OS493_017603-T1
OS493_017604-T1
OS493_017605-T1-
OS493_017606-T1-
OS493_017607-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017608-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_017609-T1PROLINE-RICH, LACRIMAL 1
OS493_017610-T1
OS493_017611-T1
OS493_017612-T1
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