About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_016171-T1ACIDIC FIBROBLAST GROWTH FACTOR INTRACELLULAR BINDING PROTEIN
LLU|FUN_016172-T1
LLU|FUN_016173-T1
LLU|FUN_016174-T1
LLU|FUN_016175-T1PHOSPHOENOLPYRUVATE CARBOXYKINASE
LLU|FUN_016176-T1
LLU|FUN_016177-T1OS10G0105400 PROTEIN
LLU|FUN_016178-T1
LLU|FUN_016179-T1MUCIN 4-RELATED
LLU|FUN_016180-T1
LLU|FUN_016181-T1MUCIN 4-RELATED
LLU|FUN_016182-T1MUCIN 4-RELATED
LLU|FUN_016183-T1RGD1565685 PROTEIN
LLU|FUN_016184-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_016185-T1C-TYPE LECTIN SUPERFAMILY MEMBER
LLU|FUN_016186-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_016187-T1
LLU|FUN_016188-T1SI:CH211-108C17.2-RELATED-RELATED
LLU|FUN_016189-T1
LLU|FUN_016190-T1
LLU|FUN_016191-T1DNA HELICASE RECQ FAMILY MEMBER
LLU|FUN_016192-T1
LLU|FUN_016193-T1
LLU|FUN_016194-T1TRANSMEMBRANE PROTEIN KIAA1109
LLU|FUN_016195-T1
LLU|FUN_016196-T1
LLU|FUN_016197-T1INTRAFLAGELLAR TRANSPORT PROTEIN 25 HOMOLOG
LLU|FUN_016198-T1TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
LLU|FUN_016199-T1DISCS LARGE
LLU|FUN_016200-T1UNCHARACTERIZED
LLU|FUN_016201-T1RFX TRANSCRIPTION FACTOR FAMILY
LLU|FUN_016202-T1DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED
LLU|FUN_016203-T1PEPTIDASE
LLU|FUN_016204-T1
LLU|FUN_016205-T1DISCS LARGE
LLU|FUN_016206-T1DISCS LARGE
LLU|FUN_016207-T1
LLU|FUN_016208-T1
LLU|FUN_016209-T1
LLU|FUN_016210-T1
LLU|FUN_016211-T1RHO GTPASE-ACTIVATING PROTEIN 100F
LLU|FUN_016212-T1
LLU|FUN_016213-T1RHO GTPASE-ACTIVATING PROTEIN 100F
LLU|FUN_016214-T1RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED
LLU|FUN_016215-T1PROTEIN FAM183B
LLU|FUN_016216-T1
LLU|FUN_016217-T1CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
LLU|FUN_016218-T1T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED
LLU|FUN_016219-T1
LLU|FUN_016220-T1
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