About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 26 27 28 29 30 31 32 33 34 35 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_001648-T1KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
OS493_001649-T1D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
OS493_001650-T1D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
OS493_001651-T1TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 61F
OS493_001652-T1PHOSPHOENOLPYRUVATE CARBOXYKINASE
OS493_001653-T1PHOSPHOENOLPYRUVATE CARBOXYKINASE
OS493_001654-T1PHOSPHOENOLPYRUVATE CARBOXYKINASE
OS493_001655-T1NIBRIN-RELATED
OS493_001656-T1NIBRIN-RELATED
OS493_001657-T1
OS493_001658-T1
OS493_001659-T1
OS493_001660-T1
OS493_001661-T1RADIAL SPOKEHEAD-RELATED
OS493_001662-T1RADIAL SPOKEHEAD-RELATED
OS493_001663-T1EXOCYST COMPLEX COMPONENT SEC5
OS493_001664-T1
OS493_001665-T1MITOCHONDRIAL GENOME MAINTENANCE PROTEIN MGM101
OS493_001666-T1PROTEIN NAKED CUTICLE
OS493_001667-T1IODOTHYRONINE DEIODINASE
OS493_001668-T1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED
OS493_001669-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
OS493_001670-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
OS493_001671-T1UNCHARACTERIZED
OS493_001672-T1
OS493_001673-T1IMPORTIN ALPHA
OS493_001674-T1PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN
OS493_001675-T1
OS493_001676-T1DNA REPAIR-SCAFFOLDING PROTEIN SPIDR
OS493_001678-T1ADENOMATOSIS POLYPOSIS COLI DOWN-REGULATED 1
OS493_001679-T1
OS493_001680-T1ADHESION G-PROTEIN COUPLED RECEPTOR
OS493_001682-T1
OS493_001683-T1CADHERIN-23
OS493_001684-T1
OS493_001685-T1
OS493_001686-T1PROTEIN FAM91A1
OS493_001687-T1
OS493_001688-T1PROTEIN FAM91A1
OS493_001689-T1PROTEIN FAM91A1
OS493_001690-T1PROTEIN FAM91A1
OS493_001691-T1
OS493_001692-T1PROTEIN FAM91A1
OS493_001693-T1PROTEIN FAM91A1
OS493_001694-T1
OS493_001695-T1REGULATOR OF G PROTEIN SIGNALING
OS493_001696-T1LEUCINE REPEAT ADAPTER PROTEIN 25
OS493_001697-T1ADHESION G-PROTEIN COUPLED RECEPTOR
OS493_001698-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_001700-T1
TOP