About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS14601NETRIN RECEPTOR UNC5
HS14602EQUILIBRATIVE NUCLEOSIDE TRANSPORTER
HS14603EQUILIBRATIVE NUCLEOSIDE TRANSPORTER
HS14604SAPOSIN-RELATED
HS14605PROPERDIN
HS14606LUNG SEVEN TRANSMEMBRANE RECEPTOR
HS14607LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN
HS14608ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI
HS14609ALPHA CATENIN
HS14610INTEGRIN ALPHA
HS14611GOLGIN
HS14612POTASSIUM CHANNEL, SUBFAMILY K
HS14613REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS14614DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
HS14615F-BOX ONLY PROTEIN
HS14616FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED
HS14617SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED
HS14618AP COMPLEX SUBUNIT MU
HS14619TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1
HS14620GLYCOPROTEIN HORMONE RECEPTOR
HS14621PIKACHURIN-LIKE PROTEIN
HS14622OS-9-RELATED
HS14623B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
HS14624PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4
HS14625WD REPEAT-CONTAINING PROTEIN 27
HS14626THROMBOSPONDIN
HS14627TYROSINE-PROTEIN KINASE RECEPTOR
HS14628UNCHARACTERIZED
HS14629
HS14630T-BOX PROTEIN-RELATED
HS14631ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS14632CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
HS14633GI:13385330
HS14634GROUP XII SECRETORY PHOSPHOLIPASE A2 FAMILY MEMBER
HS14635ENDOGLIN/TGF-BETA RECEPTOR TYPE III
HS14636ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED
HS14637CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL
HS14638EF HAND DOMAIN FAMILY A1,A2-RELATED
HS14639NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1
HS14640MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6
HS14641
HS14642
HS14643MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
HS14644POTASSIUM CHANNEL, SUBFAMILY K
HS14645UNCHARACTERIZED
HS14646G PROTEIN-COUPLED RECEPTOR
HS14647RNA METHYLTRANSFERASE
HS14648FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY
HS14649UNCHARACTERIZED
HS14650COLLAGEN ALPHA
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