About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 282 283 284 285 286 287 288 289 290 291 Forward> Last>>        450 pages in total

Gene IDDescription
HS14351PROTEIN FAM204A
HS14352RAB11-RELATED
HS14353HOMEOBOX PROTEIN EMX-RELATED
HS14354EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT
HS14355PROTEIN FAM45A-RELATED
HS14356SIDEROFLEXIN
HS14357THIOREDOXIN PEROXIDASE
HS14358TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
HS14359ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
HS14360
HS14361MOLYBDOPTERIN COFACTOR SULFURASE MOSC
HS14362KH DOMAIN CONTAINING RNA BINDING PROTEIN
HS14363BRORIN FAMILY MEMBER
HS14364ZINC FINGER PROTEIN
HS14365
HS14366AAA DOMAIN-CONTAINING
HS14367TUBULIN--TYROSINE LIGASE
HS14368UBIQUITIN-PROTEIN LIGASE E3C
HS14369ANDROGEN-INDUCED PROTEIN 1-RELATED
HS14370UNCHARACTERIZED
HS14371DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
HS14372LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
HS14373LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
HS14374DAPPER-RELATED
HS14375SECRETED MODULAR CALCIUM-BINDING PROTEIN
HS14376EUKARYOTIC TRANSLATION INITIATION FACTOR 3
HS14377CADHERIN-87A
HS14378V-TYPE IMMUNOGLOBULIN DOMAIN-CONTAINING SUPPRESSOR OF T-CELL ACTIVATION
HS14379LIPID PHOSPHATE PHOSPHATASE
HS14380WD REPEAT-CONTAINING PROTEIN 11
HS14381TYROSINE-PROTEIN KINASE RECEPTOR
HS14382ARGININE-TRNA-PROTEIN TRANSFERASE 1
HS14383GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
HS14384E3 UBIQUITIN-PROTEIN LIGASE MARCH5
HS14385CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
HS14386TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172
HS14387REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS14388CYCLINS
HS14389ZINC FINGER PROTEIN
HS14390SH2 DOMAIN CONTAINING PROTEIN
HS14391HEPARAN SULFATE SULFOTRANSFERASE
HS14392HOMEO BOX HB9 LIKE A-RELATED
HS14393REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS14394VERY KIND PROTEIN
HS14395SI:CH211-196P9.1-RELATED
HS14396G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN
HS14397NEUROTRANSMITTER GATED ION CHANNEL
HS14398OPSIN
HS14399HOMEOBOX PROTEIN NKX
HS14400TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE
TOP