About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60457TESTIS-EXPRESSED PROTEIN 49
Paelopatides60458TRANSMEMBRANE PROTEIN
Paelopatides60459TRANSMEMBRANE PROTEIN
Paelopatides60460ANTIBIOTIC RESISTANCE PROTEIN MCBG
Paelopatides60461-
Paelopatides60462TRANSMEMBRANE PROTEIN
Paelopatides60463-
Paelopatides60464EPM2A-INTERACTING PROTEIN 1
Paelopatides60465-
Paelopatides60466-
Paelopatides60467-
Paelopatides60468SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides60469SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides60470-
Paelopatides60471-
Paelopatides60472FAT ATYPICAL CADHERIN-RELATED
Paelopatides60473FAT ATYPICAL CADHERIN-RELATED
Paelopatides60474ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides60475-
Paelopatides60476RIBONUCLEASE H1
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