About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60329-
Paelopatides60330-
Paelopatides60331-
Paelopatides6033252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides60333-
Paelopatides60334ORGANIC ANION TRANSPORTER
Paelopatides60335ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides60336FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides60337F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides60338LEPTIN RECEPTOR-RELATED
Paelopatides60339-
Paelopatides60340PROTEIN CBG26694
Paelopatides60341-
Paelopatides60342ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides60343-
Paelopatides60344-
Paelopatides60345-
Paelopatides60346SI:CH211-108C17.2-RELATED-RELATED
Paelopatides60347-
Paelopatides60348INHIBITOR OF GROWTH PROTEIN
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