About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60436NITRIC OXIDE SYNTHASE OXYGENASE
Paelopatides60437EPH RECEPTOR A5
Paelopatides60438-
Paelopatides60439EPM2A-INTERACTING PROTEIN 1
Paelopatides60440FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN
Paelopatides60442-
Paelopatides60443-
Paelopatides60444-
Paelopatides60445-
Paelopatides60446POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED
Paelopatides60447POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED
Paelopatides60448-
Paelopatides60449ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides60450SELENOPROTEIN O
Paelopatides60451COSTARS FAMILY PROTEIN ABRACL
Paelopatides60452-
Paelopatides60453-
Paelopatides60454PROTEIN CBG26694
Paelopatides60455MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Paelopatides60456CHAPERONIN
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