The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS13751 | CADHERIN-23 |
HS13752 | CADHERIN-23 |
HS13753 | CADHERIN-23 |
HS13754 | - |
HS13755 | PROTEIN DISULFIDE-ISOMERASE TMX3 |
HS13756 | PX DOMAIN-CONTAINING PROTEIN 1 |
HS13757 | DUAL SPECIFICITY PROTEIN KINASE |
HS13758 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
HS13759 | CELL ADHESION MOLECULE |
HS13760 | LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE |
HS13761 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
HS13762 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
HS13763 | YALI0A06105P |
HS13764 | DNA REPLICATION REGULATOR DPB11-RELATED |
HS13765 | TRANSMEMBRANE PROTEIN 108 |
HS13766 | PROTEIN CDV3 HOMOLOG |
HS13767 | CENTROMERE PROTEIN E |
HS13768 | |
HS13769 | DISCS LARGE |
HS13770 | POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATED |
HS13771 | |
HS13772 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
HS13773 | |
HS13774 | |
HS13775 | |
HS13776 | RETINOIC ACID RECEPTOR RESPONDER PROTEIN 2 |
HS13777 | RETINOIC ACID RECEPTOR RESPONDER PROTEIN 2 |
HS13778 | ANION EXCHANGE PROTEIN |
HS13779 | UBX DOMAIN-CONTAINING PROTEIN 1 |
HS13780 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
HS13781 | CHONDROITIN SYNTHASE |
HS13782 | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D |
HS13783 | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 |
HS13784 | ASAP FAMILY MEMBER |
HS13785 | TRANSLATION FACTOR |
HS13786 | UNCHARACTERIZED |
HS13787 | MYC PROTO-ONCOGENE |
HS13788 | |
HS13789 | PROGRESSIVE ANKYLOSIS PROTEIN HOMOLOG |
HS13790 | OTU DEUBIQUITINASE WITH LINEAR LINKAGE-SPECIFICITY A-RELATED |
HS13791 | PROTEIN YAE1 HOMOLOG |
HS13792 | |
HS13793 | |
HS13794 | VACUOLAR PROTEIN SORTING VPS41 |
HS13795 | N-ACETYLTRANSFERASE ECO |
HS13796 | RETINITIS PIGMENTOSA 1 PROTEIN |
HS13797 | SOX TRANSCRIPTION FACTOR |
HS13798 | SOX TRANSCRIPTION FACTOR |
HS13799 | 50S RIBOSOMAL PROTEIN L15 |
HS13800 | LYSOPHOSPHOLIPASE-RELATED |