About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 258 259 260 261 262 263 264 265 266 267 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_014166-T1
OS493_014167-T1
OS493_014168-T1EPH RECEPTOR A5
OS493_014169-T1
OS493_014170-T1ZINC FINGER PROTEIN
OS493_014171-T1ZINC FINGER AND BTB DOMAIN-CONTAINING
OS493_014172-T1ZINC FINGER PROTEIN
OS493_014173-T1ZINC FINGER PROTEIN
OS493_014174-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
OS493_014175-T1ZINC FINGER PROTEIN 200
OS493_014176-T1RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATED
OS493_014177-T1INWARD RECTIFIER POTASSIUM CHANNEL
OS493_014180-T1ADENYLYL CYCLASE-ASSOCIATED PROTEIN
OS493_014182-T1
OS493_014183-T1
OS493_014184-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
OS493_014185-T1
OS493_014186-T1DISRUPTED IN SCHIZOPHRENIA 1 PROTEIN
OS493_014187-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
OS493_014188-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
OS493_014190-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
OS493_014191-T1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
OS493_014192-T1MICROSPHERULE PROTEIN 1
OS493_014193-T1BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED
OS493_014195-T1
OS493_014196-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_014197-T1PROPERDIN
OS493_014198-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_014199-T1TRANSCRIPTION INITIATION FACTOR TFIID
OS493_014200-T1
OS493_014201-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_014202-T1
OS493_014203-T1LUPUS LA PROTEIN-RELATED
OS493_014204-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_014206-T1
OS493_014207-T1
OS493_014208-T1
OS493_014209-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_014210-T1
OS493_014211-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_014212-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_014213-T1
OS493_014214-T1GENE, 17359-RELATED
OS493_014215-T1THYROTROPH EMBRYONIC FACTOR RELATED
OS493_014216-T1TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 1
OS493_014217-T1MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
OS493_014218-T1MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
OS493_014219-T1
OS493_014220-T1
OS493_014221-T1MALONATE-SEMIALDEHYDE DEHYDROGENASE
TOP