About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_014114-T1BONUS, ISOFORM C-RELATED
OS493_014115-T1TRIOSEPHOSPHATE ISOMERASE
OS493_014116-T1GUANINE NUCLEOTIDE EXCHANGE FACTOR
OS493_014117-T1
OS493_014118-T1
OS493_014120-T1PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
OS493_014121-T1
OS493_014122-T1
OS493_014123-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_014124-T1
OS493_014125-T1
OS493_014126-T1COPPER AMINE OXIDASE
OS493_014127-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_014128-T1CARBONIC ANHYDRASE
OS493_014129-T1
OS493_014130-T1
OS493_014131-T1
OS493_014132-T1
OS493_014133-T1COLLAGEN ALPHA
OS493_014134-T1COLLAGEN ALPHA
OS493_014135-T1
OS493_014136-T1UNCHARACTERIZED
OS493_014137-T1PROPERDIN
OS493_014138-T1COLLAGEN ALPHA
OS493_014139-T1INHIBITOR OF GROWTH PROTEIN
OS493_014140-T1
OS493_014141-T1
OS493_014142-T1KAZRIN-RELATED
OS493_014144-T1
OS493_014145-T1EPH RECEPTOR A5
OS493_014146-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_014147-T1EPH RECEPTOR A5
OS493_014148-T1EPH RECEPTOR A5
OS493_014149-T1
OS493_014150-T1
OS493_014151-T1EPH RECEPTOR A5
OS493_014152-T1EPH RECEPTOR A5
OS493_014153-T1PHOSPHOGLYCOLATE PHOSPHATASE
OS493_014154-T1ESTERASE OVCA2
OS493_014155-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
OS493_014156-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_014157-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_014158-T1EPH RECEPTOR A5
OS493_014159-T1EPH RECEPTOR A5
OS493_014160-T1ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
OS493_014161-T1
OS493_014162-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_014163-T1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
OS493_014164-T1
OS493_014165-T1
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