About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53583-
Paelopatides53584-
Paelopatides53585PROTEIN CBG26694
Paelopatides53586-
Paelopatides53587-
Paelopatides53588DNA-BINDING PROTEIN SATB FAMILY MEMBER
Paelopatides53589MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides53590HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides53591PROTEIN CBG26694
Paelopatides53592PROTEIN CBG26694
Paelopatides53593-
Paelopatides53594LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides53595-
Paelopatides53596DYNAMIN
Paelopatides53597-
Paelopatides53598DYNAMIN
Paelopatides53599UNCHARACTERIZED
Paelopatides53600INTERFERON ALPHA-INDUCIBLE PROTEIN 27
Paelopatides53601FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides53602-
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