About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS12451
HS12452METHYLTRANSFERASE N6AMT1
HS12453CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221
HS12454PDF RECEPTOR-LIKE PROTEIN-RELATED
HS12455DUDULIN-RELATED
HS12456CEREBELLIN-RELATED
HS12457HOMEOBOX PROTEIN ENGRAILED
HS12458
HS12459RETINITIS PIGMENTOSA 1 PROTEIN
HS12460GLUCOKINASE REGULATORY PROTEIN
HS12461XK-RELATED PROTEIN
HS12462ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
HS12463CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED
HS12464ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS12465TRANSMEMBRANE PROTEIN 163
HS12466CYCLIN
HS12467DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
HS12468CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN
HS12469INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN
HS12470RHO FAMILY GTPASE
HS12471MY011 PROTEIN
HS12472LY6/PLAUR DOMAIN-CONTAINING PROTEIN 6
HS12473RNA RECOGNITION MOTIF-CONTAINING
HS12474GLUCAGON
HS12475PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
HS12476CALPAIN, SMALL SUBUNIT 1 A-RELATED
HS12477VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
HS12478AAA DOMAIN-CONTAINING
HS12479CORDON-BLEU
HS12480VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
HS12481TGF-BETA INDUCED APOPTOSIS PROTEIN
HS12482XIN
HS12483OS06G0237300 PROTEIN
HS12484BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS12485ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
HS12486SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
HS12487ATP SYNTHASE
HS12488UNCHARACTERIZED
HS12489LD33804P
HS12490HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3
HS12491ZINC FINGER PROTEIN DZIP1
HS12492CLAUDIN
HS12493
HS12494CLAUDIN
HS12495CLAUDIN
HS12496ATP-BINDING CASSETTE SUB-FAMILY C
HS12497C3ORF1 PROTEIN-RELATED
HS12498NEUROTRANSMITTER GATED ION CHANNEL
HS12499NEUROTRANSMITTER GATED ION CHANNEL
HS12500NEUROTRANSMITTER GATED ION CHANNEL
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