About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS12201MICROTUBULE-ASSOCIATED PROTEIN
HS12202FATTY ACID ACYL TRANSFERASE-RELATED
HS12203
HS12204GUANYL-NUCLEOTIDE EXCHANGE FACTOR
HS12205
HS12206IKB KINASE
HS12207ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
HS12208G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
HS12209G PROTEIN COUPLED RECEPTOR, CLASS C, GROUP 5
HS12210OXIDOREDUCTASE-LIKE DOMAIN-CONTAINING PROTEIN 1
HS12211RETINAL CONE RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE GAMMA-SUBUNIT-RELATED
HS12212NUCLEAR PROTEIN LOCALIZATION 4
HS12213UNCHARACTERIZED
HS12214CENTROSOMAL PROTEIN OF 131 KDA
HS12215-
HS12216KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS12217ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS12218ZINC FINGER PROTEIN ZIC AND GLI
HS12219ZINC FINGER PROTEIN
HS12220REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS12221SERINE/THREONINE-PROTEIN KINASE LMTK1
HS12222BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2
HS12223CHARGED MULTIVESICULAR BODY PROTEIN
HS12224
HS12225ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
HS12226ANKYRIN REPEAT FAMILY PROTEIN
HS12227C10ORF188 FAMILY MEMBER
HS12228ZINC FINGER PROTEIN
HS12229ZINC FINGER PROTEIN
HS12230
HS12231KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS12232CYTOCHROME C OXIDASE SUBUNIT 6B
HS12233YALI0A06105P
HS12234ZINC FINGER PROTEIN 142
HS12235ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS12236TANDEM PH DOMAIN CONTAINING PROTEIN
HS12237WINGS APART-LIKE PROTEIN HOMOLOG
HS12238BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
HS12239IONOTROPIC GLUTAMATE RECEPTOR
HS12240UNCHARACTERIZED
HS12241
HS12242HYDROXYCARBOXYLIC ACID RECEPTOR 2
HS12243UNCHARACTERIZED
HS12244CHROMOBOX PROTEIN HOMOLOG 2
HS12245CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED
HS12246
HS12247BAP28
HS12248PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE
HS12249KINESIN-RELATED
HS12250BARDET-BIEDL SYNDROME 1 PROTEIN
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