About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_012398-T1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
OS493_012399-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_012400-T1EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
OS493_012401-T1
OS493_012402-T1
OS493_012403-T1
OS493_012404-T1
OS493_012405-T1
OS493_012406-T1
OS493_012407-T1
OS493_012409-T1NAD(P) TRANSHYDROGENASE
OS493_012411-T1MULTICOPPER OXIDASE-RELATED
OS493_012412-T1LD02310P
OS493_012414-T1
OS493_012415-T1
OS493_012416-T1
OS493_012420-T1LD11652P
OS493_012421-T1LD11652P
OS493_012422-T1
OS493_012423-T1CALCIUM-SIGNAL MODULATING CYCLOPHILIN LIGAND CAML
OS493_012424-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_012426-T1
OS493_012427-T1
OS493_012428-T1
OS493_012429-T1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
OS493_012430-T1
OS493_012431-T1ROUND SPERMATID BASIC PROTEIN 1
OS493_012432-T1DEDICATOR OF CYTOKINESIS
OS493_012433-T1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
OS493_012434-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
OS493_012435-T1
OS493_012436-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_012437-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_012440-T1
OS493_012441-T1
OS493_012442-T1
OS493_012443-T1
OS493_012445-T1
OS493_012446-T1
OS493_012447-T1
OS493_012448-T1PROLINE-RICH, LACRIMAL 1
OS493_012449-T1
OS493_012450-T1
OS493_012451-T1
OS493_012452-T1
OS493_012453-T1PROLINE-RICH, LACRIMAL 1
OS493_012454-T1
OS493_012455-T1
OS493_012456-T1
OS493_012457-T1
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