About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_012562-T1XANTHINE DEHYDROGENASE
OS493_012563-T1XANTHINE DEHYDROGENASE
OS493_012564-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
OS493_012565-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
OS493_012566-T1
OS493_012568-T1
OS493_012569-T1
OS493_012570-T1
OS493_012571-T1
OS493_012572-T1REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
OS493_012573-T1GTP CYCLOHYDROLASE 1 FEEDBACK REGULATORY PROTEIN
OS493_012574-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 17
OS493_012575-T1GLUCOSE-6-PHOSPHATASE
OS493_012577-T1
OS493_012578-T1
OS493_012579-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
OS493_012580-T15-OXOPROLINASE RELATED
OS493_012581-T1
OS493_012582-T1CYTOSOLIC PHOSPHOLIPASE A2
OS493_012583-T1CLASP
OS493_012584-T1
OS493_012585-T1
OS493_012586-T1
OS493_012587-T1
OS493_012588-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
OS493_012589-T1
OS493_012590-T1
OS493_012591-T1
OS493_012592-T1
OS493_012593-T1PROTEIN DISPATCHED-RELATED
OS493_012594-T1PROTEIN DISPATCHED-RELATED
OS493_012595-T1
OS493_012596-T1
OS493_012597-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_012598-T1
OS493_012599-T1
OS493_012600-T1
OS493_012601-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_012603-T1
OS493_012606-T1
OS493_012607-T1
OS493_012608-T1XANTHINE DEHYDROGENASE
OS493_012609-T1RAN BINDING PROTEIN 9-RELATED
OS493_012610-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_012611-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_012612-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_012613-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_012614-T1
OS493_012615-T1
OS493_012617-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
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