About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides489671-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED
Paelopatides48968REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48969REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides489701-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
Paelopatides489711-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
Paelopatides48972OPSIN
Paelopatides48973OPSIN
Paelopatides48974OPSIN
Paelopatides48975OPSIN
Paelopatides48976OPSIN
Paelopatides489771-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
Paelopatides48978ZINC FINGER PROTEIN
Paelopatides48979-
Paelopatides48980GLUTATHIONE REDUCTASE
Paelopatides48981GLUTATHIONE REDUCTASE
Paelopatides48982GLUTAREDOXIN 2
Paelopatides48983-
Paelopatides48984DNA POLYMERASE
Paelopatides48985-
Paelopatides48986-
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