About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48887ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48888-
Paelopatides48889-
Paelopatides48890SODIUM/HYDROGEN EXCHANGER
Paelopatides48891REGULATOR OF CHROMOSOME CONDENSATION
Paelopatides48892TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
Paelopatides48893LEUCOKININ RECEPTOR-RELATED
Paelopatides48894-
Paelopatides48895SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides48896SULFOTRANSFERASE SULT
Paelopatides48897INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides48898PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides48899RETROTRANSPOSON
Paelopatides48900GAG-RELATED PROTEIN
Paelopatides48901-
Paelopatides48902TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides48903ANION EXCHANGE PROTEIN
Paelopatides48904ANION EXCHANGE PROTEIN
Paelopatides48905CELL CYCLE CONTROL PROTEIN CWF25
Paelopatides48906-
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