About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48927S-ADENOSYLMETHIONINE DECARBOXYLASE
Paelopatides48928-
Paelopatides48929S-ADENOSYLMETHIONINE DECARBOXYLASE
Paelopatides48930-
Paelopatides48931PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides48932ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides48933MEIOTIC RECOMBINATION PROTEIN REC114
Paelopatides48934RNA BINDING PROTEIN
Paelopatides48935RNA BINDING PROTEIN
Paelopatides48936-
Paelopatides48937RNA BINDING PROTEIN
Paelopatides48938RNA BINDING PROTEIN
Paelopatides48939-
Paelopatides48940PROTEIN CBG26694
Paelopatides48941PROTEIN CBG26694
Paelopatides48942FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides48943AGAP008810-PA
Paelopatides48944ZINC FINGER PROTEIN
Paelopatides48945UNCHARACTERIZED
Paelopatides48946ENDONUCLEASE-RELATED
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