About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_008670-T1LYMPHOCYTE EXPANSION MOLECULE
OS493_008671-T1
OS493_008672-T1
OS493_008673-T1
OS493_008674-T1HEMK METHYLTRANSFERASE
OS493_008675-T1HEMK METHYLTRANSFERASE
OS493_008676-T1HEMK METHYLTRANSFERASE
OS493_008677-T1HEMK METHYLTRANSFERASE
OS493_008678-T1OS02G0202900 PROTEIN
OS493_008679-T1UPF0600 PROTEIN C5ORF51
OS493_008680-T1CALCIUM HOMEOSTASIS MODULATOR PROTEIN
OS493_008681-T1CALCIUM HOMEOSTASIS MODULATOR PROTEIN
OS493_008682-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
OS493_008683-T1COLLAGEN ALPHA
OS493_008685-T1
OS493_008686-T1DYSFERLIN-RELATED
OS493_008687-T1COLLAGEN ALPHA
OS493_008688-T1COLLAGEN ALPHA
OS493_008689-T1MALE FERTILITY FACTOR KL5
OS493_008690-T1MALE FERTILITY FACTOR KL5
OS493_008691-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
OS493_008692-T1DYNEIN HEAVY CHAIN
OS493_008693-T1DYNEIN HEAVY CHAIN
OS493_008694-T1MATRIN 3/NUCLEAR PROTEIN 220-RELATED
OS493_008695-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_008696-T1
OS493_008697-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_008698-T1
OS493_008699-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_008705-T1LEUCOKININ RECEPTOR-RELATED
OS493_008706-T1G-PROTEIN COUPLED RECEPTOR
OS493_008708-T1MULTICOPPER OXIDASE-RELATED
OS493_008709-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
OS493_008711-T1MULTICOPPER OXIDASE-RELATED
OS493_008712-T1MULTICOPPER OXIDASE-RELATED
OS493_008713-T1MULTICOPPER OXIDASE-RELATED
OS493_008714-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_008715-T1NUCLEAR HORMONE RECEPTOR
OS493_008716-T1NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B
OS493_008717-T1
OS493_008719-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42
OS493_008720-T1TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
OS493_008722-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_008723-T1
OS493_008725-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_008726-T1ATP-DEPENDENT RNA AND DNA HELICASE
OS493_008727-T1
OS493_008728-T1ATP-DEPENDENT RNA AND DNA HELICASE
OS493_008729-T1RFX TRANSCRIPTION FACTOR FAMILY
OS493_008730-T1
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