About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_008842-T1BLR2807 PROTEIN
OS493_008843-T1CAMK FAMILY PROTEIN KINASE
OS493_008844-T1SI:DKEY-276J7.1
OS493_008845-T1
OS493_008846-T1NEUROTRANSMITTER GATED ION CHANNEL
OS493_008847-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_008848-T1TETRA THYMOSIN
OS493_008849-T1THYMOSIN BETA
OS493_008850-T1PROTEIN ABHD18
OS493_008851-T1STERILE20-LIKE KINASE, ISOFORM B-RELATED
OS493_008853-T1
OS493_008854-T1
OS493_008855-T1DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN
OS493_008856-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
OS493_008857-T1
OS493_008858-T1
OS493_008859-T1ANION EXCHANGE PROTEIN
OS493_008860-T1ANION EXCHANGE PROTEIN
OS493_008861-T1KINETOCHORE SCAFFOLD 1
OS493_008862-T1
OS493_008863-T1
OS493_008864-T1ABC TRANSPORTER G FAMILY MEMBER 28
OS493_008865-T1
OS493_008866-T1
OS493_008867-T1
OS493_008868-T1
OS493_008869-T1
OS493_008870-T1
OS493_008871-T1
OS493_008872-T1MODULATOR OF FTSH PROTEASE HFLC
OS493_008873-T1
OS493_008874-T1
OS493_008875-T1
OS493_008876-T1
OS493_008877-T1FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED
OS493_008878-T1UNCHARACTERIZED
OS493_008879-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
OS493_008880-T1
OS493_008881-T1ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4
OS493_008883-T1
OS493_008884-T1PEPTIDE N-GLYCANASE PNGASE -RELATED
OS493_008885-T1PEPTIDE N-GLYCANASE PNGASE -RELATED
OS493_008886-T1THIOREDOXIN-LIKE PROTEIN 1
OS493_008887-T1
OS493_008888-T1MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
OS493_008889-T1RHO GUANINE EXCHANGE FACTOR-RELATED
OS493_008890-T1RHO GUANINE EXCHANGE FACTOR-RELATED
OS493_008891-T1RHO GUANINE EXCHANGE FACTOR-RELATED
OS493_008892-T1RHO GUANINE EXCHANGE FACTOR-RELATED
OS493_008893-T1
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