About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold208.1626PHD-TYPE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold208.1627ORGANIC SOLUTE TRANSPORTER-RELATED
mRNA.BJAM.scaffold208.1628
mRNA.BJAM.scaffold208.1629SNF2/RAD54 FAMILY MEMBER
mRNA.BJAM.scaffold208.1630
mRNA.BJAM.scaffold208.1631ABC1 FAMILY PROTEIN
mRNA.BJAM.scaffold208.1632LIN37 HOMOLOG
mRNA.BJAM.scaffold208.1633N-TERMINAL ASPARAGINE AMIDOHYDROLASE
mRNA.BJAM.scaffold208.1634N-TERMINAL ASPARAGINE AMIDOHYDROLASE
mRNA.BJAM.scaffold2080.10272THIOREDOXIN PEROXIDASE
mRNA.BJAM.scaffold2080.10273FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
mRNA.BJAM.scaffold2080.10274
mRNA.BJAM.scaffold2080.10275LSM1
mRNA.BJAM.scaffold2080.10276
mRNA.BJAM.scaffold2082.10277NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
mRNA.BJAM.scaffold2082.10278NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
mRNA.BJAM.scaffold2084.10279MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold2084.10280
mRNA.BJAM.scaffold2086.10281
mRNA.BJAM.scaffold2087.10282TRANSMEMBRANE PROTEASE SERINE
mRNA.BJAM.scaffold2089.10283
mRNA.BJAM.scaffold2089.10284FORKHEAD BOX PROTEIN J1
mRNA.BJAM.scaffold2089.10285FORKHEAD BOX PROTEIN J1
mRNA.BJAM.scaffold209.1635
mRNA.BJAM.scaffold209.1636
mRNA.BJAM.scaffold209.1637
mRNA.BJAM.scaffold209.1638PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
mRNA.BJAM.scaffold209.1639PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
mRNA.BJAM.scaffold209.1640PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
mRNA.BJAM.scaffold209.1641WNT RELATED
mRNA.BJAM.scaffold209.1642WNT RELATED
mRNA.BJAM.scaffold209.1643AGAP011099-PA
mRNA.BJAM.scaffold2090.10286
mRNA.BJAM.scaffold2090.10287
mRNA.BJAM.scaffold2090.10288MIXED LINEAGE PROTEIN KINASE
mRNA.BJAM.scaffold2090.10289CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2090.10290EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
mRNA.BJAM.scaffold2092.10291METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold2092.10292GUANYLYL CYCLASE
mRNA.BJAM.scaffold2092.10293LIPID PHOSPHATE PHOSPHATASE
mRNA.BJAM.scaffold2093.10294ALPHA-L-FUCOSIDASE
mRNA.BJAM.scaffold2093.10295ALPHA-L-FUCOSIDASE
mRNA.BJAM.scaffold2093.10296
mRNA.BJAM.scaffold2093.10297
mRNA.BJAM.scaffold2093.10298ALPHA-L-FUCOSIDASE
mRNA.BJAM.scaffold2093.10299
mRNA.BJAM.scaffold2093.10300
mRNA.BJAM.scaffold2093.10301ALPHA-L-FUCOSIDASE
mRNA.BJAM.scaffold2094.10302ALSIN HOMOLOG
mRNA.BJAM.scaffold2094.10303PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING
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