About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2094.10304
mRNA.BJAM.scaffold2094.10305G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED
mRNA.BJAM.scaffold2094.10306G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED
mRNA.BJAM.scaffold20946.23214
mRNA.BJAM.scaffold2095.10307GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED
mRNA.BJAM.scaffold2095.10308GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED
mRNA.BJAM.scaffold2095.10309
mRNA.BJAM.scaffold2095.10310
mRNA.BJAM.scaffold2095.10311
mRNA.BJAM.scaffold2095.10312CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2095.10313COLD SHOCK DOMAIN CONTAINING PROTEINS
mRNA.BJAM.scaffold2096.10314
mRNA.BJAM.scaffold2096.10315
mRNA.BJAM.scaffold2096.10316SH3 DOMAIN-BINDING PROTEIN 5
mRNA.BJAM.scaffold2096.10317HMG-BOX TRANSCRIPTION FACTOR BBX
mRNA.BJAM.scaffold2096.10318
mRNA.BJAM.scaffold2096.10319R3H DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold2096.10320AAA-FAMILY ATPASE
mRNA.BJAM.scaffold2096.10321FI24210P1
mRNA.BJAM.scaffold2097.10322SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
mRNA.BJAM.scaffold2097.10323
mRNA.BJAM.scaffold2097.10324FACIOGENITAL DYSPLASIA PROTEIN
mRNA.BJAM.scaffold2097.10325FACIOGENITAL DYSPLASIA PROTEIN
mRNA.BJAM.scaffold2097.10326BARRIER TO AUTOINTEGRATION FACTOR 2
mRNA.BJAM.scaffold2097.10327TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold2100.10328
mRNA.BJAM.scaffold2100.10329RAGULATOR COMPLEX PROTEIN LAMTOR1
mRNA.BJAM.scaffold2100.10330
mRNA.BJAM.scaffold2101.10331
mRNA.BJAM.scaffold2101.10332
mRNA.BJAM.scaffold2101.10333TRANSCRIPTION FACTOR E2F
mRNA.BJAM.scaffold2101.10334NUCLEAR RNA EXPORT FACTOR
mRNA.BJAM.scaffold2101.10335ELONGIN-C
mRNA.BJAM.scaffold2102.10336CUBILIN
mRNA.BJAM.scaffold2102.10337
mRNA.BJAM.scaffold2103.10338SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
mRNA.BJAM.scaffold2103.10339PROTEIN FAM91A1
mRNA.BJAM.scaffold2103.10340
mRNA.BJAM.scaffold21037.23215EGL NINE HOMOLOG-RELATED
mRNA.BJAM.scaffold2104.10341
mRNA.BJAM.scaffold2104.10342
mRNA.BJAM.scaffold2104.10343
mRNA.BJAM.scaffold2104.10344
mRNA.BJAM.scaffold2105.10345LEUCOKININ RECEPTOR-RELATED
mRNA.BJAM.scaffold2107.10347UNCHARACTERIZED
mRNA.BJAM.scaffold2107.10348ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT
mRNA.BJAM.scaffold2107.10349ADENOSINE DEAMINASE
mRNA.BJAM.scaffold2107.10350PROTEASE M14 CARBOXYPEPTIDASE
mRNA.BJAM.scaffold2108.10351UNCHARACTERIZED
mRNA.BJAM.scaffold2108.10352ANKYRIN REPEAT FAMILY PROTEIN
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