About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2109.10353
mRNA.BJAM.scaffold2109.10354
mRNA.BJAM.scaffold2109.10355APICAL PROTEIN/SHROOM-RELATED
mRNA.BJAM.scaffold2109.10356PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold2109.10357UNCHARACTERIZED
mRNA.BJAM.scaffold2109.10358
mRNA.BJAM.scaffold2109.10359
mRNA.BJAM.scaffold2109.10360UNCHARACTERIZED
mRNA.BJAM.scaffold2109.10361
mRNA.BJAM.scaffold2109.10362
mRNA.BJAM.scaffold2109.10363BRISC AND BRCA1-A COMPLEX MEMBER 2
mRNA.BJAM.scaffold2109.10364ANGIOTENSIN-CONVERTING ENZYME
mRNA.BJAM.scaffold211.1644NUDIX T16 FAMILY MEMBER
mRNA.BJAM.scaffold211.1645EXOCYST COMPLEX COMPONENT 8
mRNA.BJAM.scaffold211.1646PRESEQUENCE PROTEASE
mRNA.BJAM.scaffold211.1647PRESEQUENCE PROTEASE
mRNA.BJAM.scaffold211.1648PRESEQUENCE PROTEASE
mRNA.BJAM.scaffold211.1649UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
mRNA.BJAM.scaffold211.1650SIDESTEP PROTEIN
mRNA.BJAM.scaffold2111.10365E3 UBIQUITIN-PROTEIN LIGASE KCMF1
mRNA.BJAM.scaffold2111.10366E3 UBIQUITIN-PROTEIN LIGASE KCMF1
mRNA.BJAM.scaffold2112.10367
mRNA.BJAM.scaffold2112.10368
mRNA.BJAM.scaffold2115.10369CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2117.1037026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13
mRNA.BJAM.scaffold2117.10371
mRNA.BJAM.scaffold2117.10372
mRNA.BJAM.scaffold2118.10373HISTONE H3
mRNA.BJAM.scaffold2118.10374
mRNA.BJAM.scaffold2119.10375SER/THR PROTEIN KINASE-TRB
mRNA.BJAM.scaffold212.1651
mRNA.BJAM.scaffold212.1652
mRNA.BJAM.scaffold212.1653
mRNA.BJAM.scaffold212.1654AMYLOID PROTEIN-BINDING PROTEIN 2
mRNA.BJAM.scaffold212.1655AMYLOID PROTEIN-BINDING PROTEIN 2
mRNA.BJAM.scaffold212.1656WD40 REPEAT PROTEIN
mRNA.BJAM.scaffold212.1657WD40 REPEAT PROTEIN
mRNA.BJAM.scaffold212.1658
mRNA.BJAM.scaffold2120.10376
mRNA.BJAM.scaffold2120.10377NADH-CYTOCHROME B5 REDUCTASE
mRNA.BJAM.scaffold2120.10378NADH-CYTOCHROME B5 REDUCTASE
mRNA.BJAM.scaffold2120.10379CYCLIN
mRNA.BJAM.scaffold2120.10380VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE
mRNA.BJAM.scaffold2121.10381
mRNA.BJAM.scaffold2123.10382BLR7054 PROTEIN
mRNA.BJAM.scaffold2123.10383SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
mRNA.BJAM.scaffold2123.10384
mRNA.BJAM.scaffold2123.10385
mRNA.BJAM.scaffold2123.10386IP01015P-RELATED
mRNA.BJAM.scaffold2123.10387VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
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