About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2056.10202ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold2057.10203C2H2 ZINC FINGER CGI-62-RELATED
mRNA.BJAM.scaffold2057.10205
mRNA.BJAM.scaffold2057.10206NUCLEAR FACTOR INTERLEUKIN-3-REGULATED PROTEIN
mRNA.BJAM.scaffold2058.10207ATP-DEPENDENT RNA AND DNA HELICASE
mRNA.BJAM.scaffold2058.10210ROTATIN
mRNA.BJAM.scaffold2058.10211ROTATIN
mRNA.BJAM.scaffold2059.10212
mRNA.BJAM.scaffold2059.10213SYNAPTIC ADHESION-LIKE MOLECULE SALM
mRNA.BJAM.scaffold2059.10214REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED
mRNA.BJAM.scaffold206.1592ACROSIN-RELATED
mRNA.BJAM.scaffold206.1593ACROSIN-RELATED
mRNA.BJAM.scaffold206.1594
mRNA.BJAM.scaffold206.1595ACROSIN-RELATED
mRNA.BJAM.scaffold206.1596
mRNA.BJAM.scaffold206.1597
mRNA.BJAM.scaffold206.1598TRYPTASE-RELATED
mRNA.BJAM.scaffold206.1599SERINE PROTEASE-RELATED
mRNA.BJAM.scaffold206.1600
mRNA.BJAM.scaffold206.1601UNCHARACTERIZED
mRNA.BJAM.scaffold2061.10215
mRNA.BJAM.scaffold2061.10216METHIONINE AMINOPEPTIDASE
mRNA.BJAM.scaffold2062.10217
mRNA.BJAM.scaffold2062.10218PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
mRNA.BJAM.scaffold2063.10219TRYPSIN-RELATED
mRNA.BJAM.scaffold2063.10220
mRNA.BJAM.scaffold20632.23213ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED
mRNA.BJAM.scaffold2065.10221ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED
mRNA.BJAM.scaffold2065.10222
mRNA.BJAM.scaffold2065.10223SERINE-THREONINE PROTEIN KINASE
mRNA.BJAM.scaffold2065.10224CYPHER, ISOFORM B
mRNA.BJAM.scaffold2065.10225CYPHER, ISOFORM B
mRNA.BJAM.scaffold2066.10226SEC63 DOMAIN-CONTAINING
mRNA.BJAM.scaffold2066.10227VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
mRNA.BJAM.scaffold2066.10228VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
mRNA.BJAM.scaffold2066.10229
mRNA.BJAM.scaffold2066.1023026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3
mRNA.BJAM.scaffold2066.10231MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7
mRNA.BJAM.scaffold2067.10232LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold2067.10233LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold2067.10234TALIN
mRNA.BJAM.scaffold2068.10235
mRNA.BJAM.scaffold2068.10236EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E
mRNA.BJAM.scaffold2068.10237CHONDROITIN SYNTHASE
mRNA.BJAM.scaffold2068.10238
mRNA.BJAM.scaffold2069.10239MANNOSE-6-PHOSPHATE ISOMERASE
mRNA.BJAM.scaffold2069.10240MANNOSE-6-PHOSPHATE ISOMERASE
mRNA.BJAM.scaffold2069.10241SARCOGLYCANS
mRNA.BJAM.scaffold2069.10242
mRNA.BJAM.scaffold2069.10243
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