About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2041.10154CALCIUM BINDING PROTEINS
mRNA.BJAM.scaffold2042.10155
mRNA.BJAM.scaffold2042.10156ATP-BINDING TRANSPORT PROTEIN-RELATED
mRNA.BJAM.scaffold20421.23211RUVB-RELATED REPTIN AND PONTIN
mRNA.BJAM.scaffold2043.10157
mRNA.BJAM.scaffold2043.10158
mRNA.BJAM.scaffold2043.10159
mRNA.BJAM.scaffold2044.10160DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]
mRNA.BJAM.scaffold2044.10161
mRNA.BJAM.scaffold2044.10162
mRNA.BJAM.scaffold2044.10163
mRNA.BJAM.scaffold2044.10164
mRNA.BJAM.scaffold2044.10165
mRNA.BJAM.scaffold2044.10166
mRNA.BJAM.scaffold2044.10167CORTACTIN AND DREBRIN
mRNA.BJAM.scaffold2044.10168SPLICING FACTOR YJU2
mRNA.BJAM.scaffold2045.10169
mRNA.BJAM.scaffold2047.10170
mRNA.BJAM.scaffold2047.10171
mRNA.BJAM.scaffold2047.10172
mRNA.BJAM.scaffold2048.10173ATP-DEPENDENT RNA HELICASE RHLE-RELATED
mRNA.BJAM.scaffold2048.10174
mRNA.BJAM.scaffold2048.10175
mRNA.BJAM.scaffold2048.10176
mRNA.BJAM.scaffold2048.10177
mRNA.BJAM.scaffold2048.10178PROTEIN ARGININE N-METHYLTRANSFERASE
mRNA.BJAM.scaffold2048.10179
mRNA.BJAM.scaffold2048.10180
mRNA.BJAM.scaffold2048.10181PHOSPHODIESTERASE HL
mRNA.BJAM.scaffold2048.10182ATP SYNTHASE GAMMA-RELATED
mRNA.BJAM.scaffold2048.10183
mRNA.BJAM.scaffold2048.10184
mRNA.BJAM.scaffold2048.10185SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT
mRNA.BJAM.scaffold2048.10186UNCHARACTERIZED
mRNA.BJAM.scaffold2048.10187UNCHARACTERIZED
mRNA.BJAM.scaffold2049.10188PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED
mRNA.BJAM.scaffold205.1591
mRNA.BJAM.scaffold2050.10189ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 61
mRNA.BJAM.scaffold2052.10190METALLOPROTEASE INHIBITOR
mRNA.BJAM.scaffold2052.10191RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN
mRNA.BJAM.scaffold2052.10192NEGATIVE ELONGATION FACTOR D
mRNA.BJAM.scaffold2052.10193DNA TOPOISOMERASE/GYRASE
mRNA.BJAM.scaffold2053.10195RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold2053.10196RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold2053.10197UNCHARACTERIZED
mRNA.BJAM.scaffold2053.10198CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold20530.23212POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATED
mRNA.BJAM.scaffold2054.10199
mRNA.BJAM.scaffold2054.10200IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold2055.10201
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