About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold20.132PROTEIN CBG13728
mRNA.BJAM.scaffold20.133
mRNA.BJAM.scaffold20.134
mRNA.BJAM.scaffold20.135
mRNA.BJAM.scaffold20.136GLUTAMINE SYNTHETASE
mRNA.BJAM.scaffold20.137GLUTAMINE SYNTHETASE
mRNA.BJAM.scaffold20.138GLUTAMINE SYNTHETASE
mRNA.BJAM.scaffold20.139GLUTAMINE SYNTHETASE
mRNA.BJAM.scaffold20.140
mRNA.BJAM.scaffold20.141DIPHOSPHOINOSITOL PENTAKISPHOSPHATE KINASE
mRNA.BJAM.scaffold20.142
mRNA.BJAM.scaffold20.143XAP-5 PROTEIN-RELATED
mRNA.BJAM.scaffold20.144MYOSIN LIGHT CHAIN 1, 3
mRNA.BJAM.scaffold20.145
mRNA.BJAM.scaffold20.146
mRNA.BJAM.scaffold20.147MYOSIN
mRNA.BJAM.scaffold20.148MYOSIN
mRNA.BJAM.scaffold20.149EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
mRNA.BJAM.scaffold20.150FRUCTOSE-2,6-BISPHOSPHATASE TIGAR
mRNA.BJAM.scaffold20.151RIBONUCLEASE
mRNA.BJAM.scaffold20.152CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold20.153NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
mRNA.BJAM.scaffold200.1581
mRNA.BJAM.scaffold2000.10032
mRNA.BJAM.scaffold2000.10033
mRNA.BJAM.scaffold2000.10034NOTCH LIGAND FAMILY MEMBER
mRNA.BJAM.scaffold2000.10035CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
mRNA.BJAM.scaffold2000.10036
mRNA.BJAM.scaffold2000.10037
mRNA.BJAM.scaffold2001.10038MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER
mRNA.BJAM.scaffold2001.10039MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER
mRNA.BJAM.scaffold2002.10040IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold2002.10041
mRNA.BJAM.scaffold2002.10042
mRNA.BJAM.scaffold2002.10043UNCHARACTERIZED
mRNA.BJAM.scaffold2003.10044
mRNA.BJAM.scaffold2004.10045LEUCINE RICH REPEAT FAMILY PROTEIN
mRNA.BJAM.scaffold2005.10046VACUOLAR ATP SYNTHASE SUBUNIT G
mRNA.BJAM.scaffold2005.10047LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold2005.10048
mRNA.BJAM.scaffold20056.23209TETRATRICOPEPTIDE REPEAT PROTEIN 4
mRNA.BJAM.scaffold2006.10049
mRNA.BJAM.scaffold2006.10050GLUTATHIONE PEROXIDASE
mRNA.BJAM.scaffold2006.10051SOLUTE CARRIER FAMILY 35
mRNA.BJAM.scaffold2006.10052GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING
mRNA.BJAM.scaffold2006.10053
mRNA.BJAM.scaffold2006.10054SEMAPHORIN
mRNA.BJAM.scaffold2007.10055ZINC FINGER PROTEIN
mRNA.BJAM.scaffold2007.10056
mRNA.BJAM.scaffold2007.10057ACTIN
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