About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1954.9853ET TRANSLATION PRODUCT-RELATED
mRNA.BJAM.scaffold1954.9854ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold1954.9855
mRNA.BJAM.scaffold1954.9856ADENOSYLHOMOCYSTEINASE
mRNA.BJAM.scaffold1954.9857TATA ELEMENT MODULATORY FACTOR TMF1
mRNA.BJAM.scaffold1955.9858ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold1955.9859ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold1955.9860ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold1955.9861ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold1955.9862ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold1956.9863CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold1956.9864
mRNA.BJAM.scaffold1956.9865CONTACTIN 5
mRNA.BJAM.scaffold1956.9866CONTACTIN 5
mRNA.BJAM.scaffold1956.9867
mRNA.BJAM.scaffold1956.9868PROTEIN SIDEKICK
mRNA.BJAM.scaffold1956.9869PROTEIN SIDEKICK
mRNA.BJAM.scaffold1956.9870
mRNA.BJAM.scaffold1956.9871
mRNA.BJAM.scaffold1958.9872
mRNA.BJAM.scaffold1958.9873TRANSLATION ELONGATION FACTOR-RELATED
mRNA.BJAM.scaffold1959.9874ATP SYNTHASE DELTA CHAIN
mRNA.BJAM.scaffold1959.9875INTEGRIN BETA SUBUNIT
mRNA.BJAM.scaffold1959.9876INTEGRIN BETA SUBUNIT
mRNA.BJAM.scaffold1959.9877INTEGRIN BETA SUBUNIT
mRNA.BJAM.scaffold1959.9878INTEGRIN BETA SUBUNIT
mRNA.BJAM.scaffold1959.9879
mRNA.BJAM.scaffold1959.9880
mRNA.BJAM.scaffold196.1518
mRNA.BJAM.scaffold196.1519CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold196.1520TITIN
mRNA.BJAM.scaffold1960.9882SH2 DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold1960.9883
mRNA.BJAM.scaffold1960.9884ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold1961.9885
mRNA.BJAM.scaffold1961.9886
mRNA.BJAM.scaffold1961.9887
mRNA.BJAM.scaffold1961.9888
mRNA.BJAM.scaffold1961.9889PROTEASOME SUBUNIT ALPHA/BETA
mRNA.BJAM.scaffold1961.9890PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold1961.9891PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold1961.9892
mRNA.BJAM.scaffold1963.9893ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER
mRNA.BJAM.scaffold1963.9894TRPL TRANSLOCATION DEFECT PROTEIN 14
mRNA.BJAM.scaffold1963.9895NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
mRNA.BJAM.scaffold1963.9896NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
mRNA.BJAM.scaffold1963.9897CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold1963.9898CONTACTIN 5
mRNA.BJAM.scaffold1964.9899DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED
mRNA.BJAM.scaffold1964.9900RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED
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