About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1935.9775CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
mRNA.BJAM.scaffold1935.9776
mRNA.BJAM.scaffold1936.9777
mRNA.BJAM.scaffold1936.9778
mRNA.BJAM.scaffold1936.9779
mRNA.BJAM.scaffold1936.9780VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
mRNA.BJAM.scaffold1939.9781NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED
mRNA.BJAM.scaffold1939.9782SOLEUCYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold1939.9783
mRNA.BJAM.scaffold194.1493OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold194.1494OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold194.1495TUBULIN-SPECIFIC CHAPERONE A
mRNA.BJAM.scaffold194.1496PROGRAMMED CELL DEATH PROTEIN 7
mRNA.BJAM.scaffold194.1497ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1
mRNA.BJAM.scaffold194.1498AAA DOMAIN-CONTAINING
mRNA.BJAM.scaffold194.1499AAA DOMAIN-CONTAINING
mRNA.BJAM.scaffold194.1500DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
mRNA.BJAM.scaffold194.1501FAMILY WITH SEQUENCE SIMILARITY 102
mRNA.BJAM.scaffold194.1502CYTOCHROME C1
mRNA.BJAM.scaffold194.1503SCD6 PROTEIN-RELATED
mRNA.BJAM.scaffold194.1504UNCHARACTERIZED
mRNA.BJAM.scaffold194.1505
mRNA.BJAM.scaffold194.1506MYOSIN HEAVY CHAIN, NON-MUSCLE
mRNA.BJAM.scaffold194.1507
mRNA.BJAM.scaffold194.1508
mRNA.BJAM.scaffold194.1509
mRNA.BJAM.scaffold194.1510
mRNA.BJAM.scaffold1941.9784
mRNA.BJAM.scaffold1941.9785
mRNA.BJAM.scaffold1941.9786
mRNA.BJAM.scaffold1941.9787VITELLINE MEMBRANE OUTER LAYER PROTEIN I-RELATED
mRNA.BJAM.scaffold1941.9788VITELLINE MEMBRANE OUTER LAYER PROTEIN I-RELATED
mRNA.BJAM.scaffold1941.9789PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
mRNA.BJAM.scaffold1941.9790RBM25 PROTEIN
mRNA.BJAM.scaffold1941.9791TRANSMEMBRANE INNER EAR EXPRESSED PROTEIN
mRNA.BJAM.scaffold1941.9792UBIQUITIN-CONJUGATING ENZYME E2
mRNA.BJAM.scaffold1941.9793RHO FAMILY GTPASE
mRNA.BJAM.scaffold1941.9794U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
mRNA.BJAM.scaffold1942.9795BEAT PROTEIN
mRNA.BJAM.scaffold1943.9796FATTY ACID AMIDE HYDROLASE
mRNA.BJAM.scaffold1944.9797ALDEHYDE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold1944.9798AXIN
mRNA.BJAM.scaffold1944.9799
mRNA.BJAM.scaffold1944.9800
mRNA.BJAM.scaffold1944.9801AXIN
mRNA.BJAM.scaffold1945.9802ACTIN
mRNA.BJAM.scaffold1945.9803
mRNA.BJAM.scaffold1945.9804
mRNA.BJAM.scaffold1946.9805COATOMER SUBUNIT EPSILON
mRNA.BJAM.scaffold1947.9806BETA-AMYLOID BINDING PROTEIN-RELATED
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