About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1925.9734
mRNA.BJAM.scaffold1926.9735
mRNA.BJAM.scaffold1926.9736PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4
mRNA.BJAM.scaffold1926.9737
mRNA.BJAM.scaffold1926.9738CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold1926.9739
mRNA.BJAM.scaffold1927.9740
mRNA.BJAM.scaffold1927.9741
mRNA.BJAM.scaffold1927.9742RIBOSOMAL PROTEIN L13
mRNA.BJAM.scaffold1927.9743ATP-BINDING TRANSPORT PROTEIN-RELATED
mRNA.BJAM.scaffold1928.9744
mRNA.BJAM.scaffold1928.9745TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold1928.9746ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
mRNA.BJAM.scaffold1928.9747ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
mRNA.BJAM.scaffold1928.9748ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
mRNA.BJAM.scaffold1928.9749
mRNA.BJAM.scaffold1928.9750CGI-41 METHYLTRANSFERASE
mRNA.BJAM.scaffold1929.9751NEUROLIGIN
mRNA.BJAM.scaffold193.1484
mRNA.BJAM.scaffold193.1485GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5
mRNA.BJAM.scaffold193.1486
mRNA.BJAM.scaffold193.1487
mRNA.BJAM.scaffold193.1488SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG
mRNA.BJAM.scaffold193.1489SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG
mRNA.BJAM.scaffold193.1490TITIN
mRNA.BJAM.scaffold193.1491PROTEIN SIDEKICK
mRNA.BJAM.scaffold193.1492BASIGIN RELATED
mRNA.BJAM.scaffold1930.9752RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
mRNA.BJAM.scaffold1930.9753
mRNA.BJAM.scaffold1930.9754
mRNA.BJAM.scaffold1930.9755
mRNA.BJAM.scaffold1930.9756
mRNA.BJAM.scaffold1931.9757
mRNA.BJAM.scaffold1931.9758DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
mRNA.BJAM.scaffold1931.9759
mRNA.BJAM.scaffold1931.9760PROTEIN KINASE PKN/PRK1, EFFECTOR
mRNA.BJAM.scaffold1931.9761
mRNA.BJAM.scaffold1931.9762
mRNA.BJAM.scaffold1931.9763F-BOX ONLY PROTEIN 22
mRNA.BJAM.scaffold1931.9764
mRNA.BJAM.scaffold1931.9765SOX TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold1932.9766RNA HELICASE
mRNA.BJAM.scaffold1932.9767VACUOLAR PROTEIN SORTING 26 RELATED
mRNA.BJAM.scaffold1932.9768
mRNA.BJAM.scaffold1932.9769
mRNA.BJAM.scaffold1932.977040S RIBOSOMAL PROTEIN S19
mRNA.BJAM.scaffold1932.977140S RIBOSOMAL PROTEIN S19
mRNA.BJAM.scaffold1933.9772
mRNA.BJAM.scaffold1934.9773
mRNA.BJAM.scaffold1934.9774
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